Pedobacter sp. D749: KYH19_02260
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Entry
KYH19_02260 CDS
T10701
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pev Pedobacter sp. D749
Pathway
pev03030
DNA replication
pev03430
Mismatch repair
pev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KYH19_02260
03430 Mismatch repair
KYH19_02260
03440 Homologous recombination
KYH19_02260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pev03032
]
KYH19_02260
03400 DNA repair and recombination proteins [BR:
pev03400
]
KYH19_02260
Enzymes [BR:
pev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KYH19_02260
DNA replication proteins [BR:
pev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KYH19_02260
DNA repair and recombination proteins [BR:
pev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KYH19_02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_14
RCF1-5-like_lid
AAA_5
TIP49
DNA_pol3_delta_C
Rad17
AAA_2
AAA_30
VapE-like_dom
AAA_24
AAA_18
AAA_16
RNA_helicase
PIF1
AAA_19
AAA_7
nSTAND3
AAA_assoc_2
QueC
DUF4829
Motif
Other DBs
NCBI-ProteinID:
QXU42447
LinkDB
All DBs
Position
complement(565099..566922)
Genome browser
AA seq
607 aa
AA seq
DB search
MENFIVSARKYRPATFETVVGQQHITGTLKNAIKNNQLAQAFLFCGPRGVGKTTCARILA
KTINCTNPTADMEACGQCDNCLSFQNGHSFNVHELDAASNNSVDDIRSLIEQVRIPPQAG
KYKIYIIDEVHMLSQSAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI
QVEDIASHLSTIAQRENIAFESDGLHIIAQKADGGLRDALSMFDQIASYANKNITYKAVI
DNLNILDYDYFFKLTSYLTAAEVSQTLLLFDEILNNGFDGNNFINGLASHFRNLLVGKDA
ATIKLLEVSENIKQKYLDQCRQTELSFLLTALNLANTCDLNYKNSKNQRLQVELALIKMC
HIRSVVNLAQQPLSPNNTATDADQDKKKTNVVAEPAESSKPKVEVENTAQAAAPVVNTPV
SPSIPVAEKPKESPRVGPPPSATSISINIPRANAISTLIPSLNDLERVAQGDDDDGPKKV
TGDARESFSYDRLLEVWNAFTQKMKATDRINLFTILNNFAPTLLNPQLIEISVESKTQEH
LVQQESVELLNFLRNELRNFGVEVTYKLMERKIENRLYGNREKYDYLVNKNPKLDELRRR
FNLDINP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattttatcgtttctgcccgtaaataccgcccagccaccttcgaaaccgttgtt
ggccagcagcacattactggtacgttaaaaaacgccattaaaaacaatcagcttgcccag
gcatttttattttgcgggccgcgtggggtgggtaaaacaacctgcgcacgtatccttgca
aaaaccattaactgtactaatcctacagcagatatggaagcttgtggtcaatgcgacaat
tgtctttctttccagaacgggcattcctttaatgttcacgaattagatgcggcatcaaac
aactcagttgatgatatccgtagcttaattgagcaggttcgtataccgccccaagcggga
aaatataagatctatatcattgatgaggttcacatgttatctcagagtgcatttaatgcc
tttctgaaaacattggaagaaccgccttcttatgctatttttatcctggccactaccgaa
aaacataaaatcctgccgactattttatcgcgttgccagatttttgatttcaaccgtatc
caggtagaagatattgccagccacctgtcaaccattgcccaacgcgaaaatattgctttc
gaaagtgatggtttacacattattgctcaaaaagcagatggtggtttgcgtgatgcactt
tcgatgttcgatcagattgccagttatgccaataagaacatcacttataaagcggtaatc
gacaacctcaacattttagattacgattacttttttaaacttacttcttacctaaccgca
gcagaagttagccagaccctgcttctgttcgatgaaattctgaacaatggttttgatggc
aacaactttatcaatggtttggccagtcacttccggaacctattagtaggtaaagatgcc
gctaccattaaattgttggaggtgagtgaaaatatcaaacaaaagtaccttgatcagtgc
aggcaaacagaattatcgtttttattaacggcattaaatttggccaatacctgcgatctg
aattataagaattctaaaaaccagcgtttgcaggtagagttggcactgattaaaatgtgc
cacatcaggtcggtcgtcaatctagctcaacagcctttaagccctaataacacagcaact
gacgcagatcaggataaaaaaaaaactaatgtcgtagctgagccggctgaaagctcgaag
ccaaaagttgaggttgaaaataccgctcaagccgccgcacctgttgttaatactcctgtt
tcacctagcataccagtagcagaaaagccaaaggaaagtccgcgggttggtccgccacca
tctgccacttccatcagtattaatattccaagggcaaacgcaatcagtacactcatccct
tcgttaaatgatttggaacgtgtagcccagggagatgatgatgacggacccaaaaaagtt
acgggcgatgccagagaatccttcagttacgaccgtttacttgaggtctggaatgccttt
acccaaaagatgaaggccactgaccggattaatctttttaccatcttaaacaattttgct
cctacacttttaaatcctcagctaatcgagatttcggtagagagtaaaacgcaggagcat
cttgtacaacaagagtctgttgaacttttaaattttttacggaacgagcttagaaacttt
ggtgttgaggttacttataagttaatggagcgcaagatagaaaacaggctctacggaaat
cgcgaaaagtatgattacctcgtaaacaaaaatccaaagctggacgaattgcgccggagg
tttaatttagatattaatccgtaa
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