Pedobacter sp. D749: KYH19_03400
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Entry
KYH19_03400 CDS
T10701
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pev Pedobacter sp. D749
Brite
KEGG Orthology (KO) [BR:
pev00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pev01002
]
KYH19_03400
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pev01011
]
KYH19_03400
Peptidases and inhibitors [BR:
pev01002
]
Cysteine peptidases
Family C82
KYH19_03400
Peptidoglycan biosynthesis and degradation proteins [BR:
pev01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KYH19_03400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Cas_Csa4
Motif
Other DBs
NCBI-ProteinID:
QXU42663
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All DBs
Position
811752..813314
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AA seq
520 aa
AA seq
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MKKFRFLILPFILFISACGWFKSPPEIGKVLSEHFKNKIYKDFDTVAYDSIFVKTMDSLS
GKFVNPKTIKAFYANNNAQPKLVTQFYINGELDSLVSYLDQSKVHGFNSKIFKGDEIKSL
LAVLAANKFKKVDESYPVIAKLELLSANAYLNYNNYLKYGVVNPRTIFSRYYIKVKRPDS
LGMINLLSGKSLLDTLRSVQPKSVQYKALQSAYLNTDVESEKRILLLNMERFRWKMPETG
GNYVQVNIPDFRLTWLDKTDTVITMKVCVGGKRENGYEDKLKAFAKSGNLDDKPKNHETP
LLFSKINSIQANPIWNIPVSIAQSEIYWMARKDPYYLSNSNIKVYYKDKLIGEPDTINWN
RYSRDKLPFKFKQGSGGGNALGKFKFIFDNSSSIYLHDTNNKNGFNLTNRAISHGCVRIE
KPLEFAALLVKDSYAYDKLRAEVDLPPIDSAHMKWYRKRMAQKADTTKAFQLKPAWFAPK
KNVPLIITYITAWSQNDRIEYRPDVYGMDEKLWTAMKKFR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagtttcgctttctaattctgccctttattttgttcatttctgcctgtgggtgg
tttaaaagcccaccagagattgggaaagtgctttctgagcattttaagaataaaatctat
aaagatttcgatactgtagcttatgacagcatttttgtgaaaacaatggacagtctttcg
ggcaaattcgttaaccctaaaactataaaagcattttatgccaataataatgctcaacct
aagttggttacgcaattctatattaatggagaattagattcattagtgagttatttagat
caaagtaaggtgcatggctttaactcaaagatctttaaaggggatgaaattaaaagcttg
ttagcagtgttagcagccaataaatttaaaaaagttgacgaaagttatcctgtaattgcc
aaattagagctgctatcggcaaatgcttatttaaactataataattaccttaaatacgga
gtcgtaaatccccgaactatcttttcgcgttattacattaaagtaaaacgcccggacagc
ttggggatgattaatcttttaagtggtaaaagtcttttggataccttaagatctgttcaa
ccaaaatcggttcaatataaagctttacagtctgcctatttaaatacagatgtggaaagt
gagaagcgtattttattattgaatatggaacgtttccgttggaaaatgccagagacggga
ggtaactatgtgcaggtaaatattcctgattttagattaacctggctagataaaacagat
accgtaattacgatgaaagtttgtgttggtggcaagcgtgaaaatggttatgaagataag
ctaaaagcctttgcaaaatcgggtaatctggatgataaaccaaagaaccatgagacacca
ctattgttcagtaaaatcaactccattcaggccaatccaatctggaatattccggtaagt
attgcccaaagtgagatctattggatggctcgaaaagatccttattatttatcgaatagc
aacattaaagtttactataaagacaagctaattggtgagcctgataccatcaattggaac
aggtattcgcgtgataaattgcccttcaaatttaagcagggatcaggcggtggaaacgct
ttagggaagttcaaatttatcttcgataacagctcgagtatttacctgcacgacaccaat
aataagaacggatttaacctaaccaatagagcgattagtcacggctgtgtacgcatcgaa
aagccgttagaatttgccgcacttttggtgaaagattcttatgcttatgataagcttagg
gcagaggtagatttaccaccgatagatagtgcgcatatgaaatggtatagaaagcgcatg
gcccaaaaggcagataccactaaagcatttcaattaaaaccagcttggtttgccccaaag
aaaaatgttccattaatcattacctatatcactgcctggtcgcaaaatgacaggatcgaa
tacagacctgatgtgtacggtatggatgaaaaactttggactgcaatgaaaaagttcagg
tag
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