Pedobacter sp. D749: KYH19_03925
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Entry
KYH19_03925 CDS
T10701
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pev Pedobacter sp. D749
Pathway
pev02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pev00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KYH19_03925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pev03021
]
KYH19_03925
Transcription machinery [BR:
pev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KYH19_03925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
UPF0122
PgaD
NPV_P10
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QXU42758
LinkDB
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Position
complement(940880..941740)
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AA seq
286 aa
AA seq
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MRQLKITQSITNRESQSLDKYLHEIGKVDLITAEEEVILARKIREGDQAALERLTKTNLR
FVVSVAKQYQNQGLTLGDLINEGNLGLIKAAKRFDETKGFKFISYAVWWIRQSILQAIAE
QSRIVRLPLNQVGSLSKISKAFSKLEQEYEREPSPEELADILETTVDKISDTLSNSGRHV
SMDAPFVQGEENTLLDVLENHEPNTDSSLINESLSEEIKRSLSTLTEREREIIVLFFGLG
SNHPLSLEEIGEKFNLTRERVRQIKDKALQRLRHTSRSKILKSYLG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactcaagataacgcaatccataaccaaccgtgaaagtcagtcgttagataaa
tacctacacgaaattggtaaagtagatttaataacagcagaagaggaagtaattttagca
aggaaaatccgtgagggcgatcaggccgcattagagcgcttaactaaaaccaacttacgt
ttcgttgtgtctgttgcaaaacaatatcaaaatcaaggtttaactttaggagatttaatt
aacgaaggtaacctgggtttaattaaagcggcaaaacgttttgatgaaactaaaggtttc
aagttcatttcttatgcagtttggtggatccgtcaatctattttgcaggcaattgccgag
caaagccgtattgtgcgtttgcctttaaaccaggtaggttcgttaagtaaaatcagcaaa
gcgttttctaaactggagcaggaatacgaacgtgagccttctccggaagaattagcagat
attttagagacaactgtagataaaatctcagatactttaagtaactctggtcgtcacgta
tctatggatgctccttttgtacaaggtgaagaaaatacattattggatgtattggaaaac
catgagccaaatacagatagttcattgatcaatgaatctttatcagaagagattaaacgt
tctttatctaccttaactgagagagaaagagaaattatcgttttattcttcggcttaggt
tctaaccacccactttcgttagaggaaattggtgagaaatttaatttaacacgcgagcgc
gttcgtcagattaaagataaagcattacaacgcttacgtcatacttcaagaagcaagatc
ttaaaatcttatttaggataa
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