Pedobacter sp. D749: KYH19_05555
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Entry
KYH19_05555 CDS
T10701
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pev Pedobacter sp. D749
Pathway
pev00040
Pentose and glucuronate interconversions
pev01100
Metabolic pathways
pev02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pev00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KYH19_05555
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KYH19_05555
Enzymes [BR:
pev01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
KYH19_05555
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
QXU43060
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Position
complement(1344952..1346064)
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AA seq
370 aa
AA seq
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MRNKYLLTCLMAAAMAFSLPACKKSNQSESNETTNKNVASPMAVTEAVCPSKGWASQNGG
TTGGGEVTATVVTTYTALKSAIQNTSVKVIQVNGTITIPSGGRISFQDQSGKTIFGSSGA
KLVSADQTKDNSGIMYIKRCNNIIIRNIIFEGPGAYDVDGQDNVTVDACNNIWVDHCEFR
DGVDGNFDLKNISDYITVSYCKFSYLKPPKSGGSGGSDDHRFSNLIGSSDGATTDRGHFR
ITFVRCWWAQGAVARMPRVRFGKVHIVNNLFNSTVSKSCIQAGFEANILVESNVFENVKN
PIDLMDNTSTAVQAKNNLFTAVTGNTSGNGVNAFTPPYSLTILNASSVKSTVTASNGAGA
TLTGNACSSL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacaagtatttattaacatgcctgatggctgctgccatggcattttctttgcct
gcgtgcaaaaaaagtaatcaatctgaaagcaatgagaccacgaacaaaaacgttgcttca
ccaatggctgttacagaagcagtttgcccatcaaagggctgggcatcacaaaacggtgga
acaaccggtggcggcgaagtaacggccaccgtggtaaccacttataccgcactgaagtca
gccattcaaaataccagcgtgaaggtaatccaggtaaacggaaccatcaccattccatcc
ggcgggagaatttcctttcaggaccagagcggaaaaacgatttttggttcatcaggtgcc
aaacttgtttcggccgatcaaacaaaagacaattcagggattatgtatattaagagatgt
aacaacatcatcatcagaaatatcatttttgaaggccccggtgcttatgatgttgacgga
caagacaatgtaaccgttgatgcctgcaataacatctgggttgatcattgcgagtttaga
gatggtgtggatggcaattttgatctcaaaaacatttcagattacatcacggtatcttat
tgcaaattttcttacctcaaaccaccaaaatcaggtggttcgggcggatctgatgatcac
cgcttctcaaacctgatcggatcaagcgatggtgccactacagacagaggtcactttcgg
atcacatttgtacgttgctggtgggcgcagggtgctgtagccagaatgccacgtgtaaga
tttggcaaagtgcatattgtaaataatttatttaacagtacggtaagtaaaagctgtatt
caggccggatttgaagccaatattttagtggaatcaaacgtttttgaaaacgtgaaaaac
ccaattgatttgatggacaatacctctacagcggttcaggcaaaaaataatctttttaca
gccgtaaccggaaatacttcaggtaatggtgtaaatgcatttacgccaccttacagcctg
actatactaaatgcttccagtgtaaaatctaccgtaacggcatcaaacggcgcaggggca
acacttacaggcaatgcatgttcatcgctgtaa
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