Pedobacter sp. D749: KYH19_06875
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Entry
KYH19_06875 CDS
T10701
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pev Pedobacter sp. D749
Pathway
pev00541
Biosynthesis of various nucleotide sugars
pev01100
Metabolic pathways
pev01250
Biosynthesis of nucleotide sugars
Module
pev_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pev00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KYH19_06875 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pev01005
]
KYH19_06875 (kdsB)
Enzymes [BR:
pev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
KYH19_06875 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pev01005
]
Lipid A
KYH19_06875 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
QXU43304
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Position
complement(1731944..1732723)
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AA seq
259 aa
AA seq
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MIDKNSSVNAKIIGIIPARYASTRFPGKPLVDIAGKTMIQRVYEQASKAESLSKVVIATD
DVRIADEVTRFGGEFIFTSSNHQSGTDRCAEVIETLTGYDIVINIQGDEPFIEPAQIDLL
ASCFIEEKVQLATLIKSIQSQESVYNPNSPKVVIDVNGRAMYFSRSPIPFIRNGEPGVWA
EKHQFYKHIGIYGYRTESLKVITKLPPSSLEIAESLEQLRWIENGFYIQTKVTDLETVAI
DTPEDLLKLNNLLEALKHD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgattgataaaaattcatcagtaaatgcgaagatcataggcattattccggcgcgatat
gcctctacccgctttccgggaaaacctttggtagatattgccggaaaaaccatgatccaa
agggtttatgagcaagcatcgaaagccgaaagcttatcaaaagtagtaattgccaccgat
gatgtacggattgcggatgaagtgaccaggtttggtggagaatttatctttacctcctct
aatcaccaaagcggaacggacaggtgcgcagaagtgattgaaactttaacgggatacgat
atcgtgatcaatatccagggcgatgaaccttttatcgaacctgcccagatcgatttattg
gcaagctgttttattgaagaaaaagtacagctagcaacattaatcaaatctattcaaagt
caggaaagtgtatacaatcccaatagccctaaagtagtgattgatgtgaatggcagggcg
atgtattttagccgcagtccaatcccttttatcagaaatggtgaaccgggtgtatgggca
gagaaacaccagttttataaacacatcgggatttacggttaccgcacggagtcgttaaaa
gtcattaccaaacttcctccatcctctttagagattgccgaaagtttggaacagctgcgc
tggattgaaaatggattttatatccaaaccaaagttaccgaccttgaaactgttgctatt
gatacccctgaagacttattgaaattaaataatctattggaggcactgaagcacgactaa
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