Pedobacter sp. D749: KYH19_12410
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Entry
KYH19_12410 CDS
T10701
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pev Pedobacter sp. D749
Pathway
pev03420
Nucleotide excision repair
pev03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KYH19_12410
03430 Mismatch repair
KYH19_12410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pev03400
]
KYH19_12410
Enzymes [BR:
pev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KYH19_12410
DNA repair and recombination proteins [BR:
pev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KYH19_12410
MMR (mismatch excision repair)
Other MMR factors
KYH19_12410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
ResIII
AAA_12
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXU44312
LinkDB
All DBs
Position
3082711..3085014
Genome browser
AA seq
767 aa
AA seq
DB search
MDYLAGLNPQQRAAVENTKGPVMIVAGAGSGKTRVITFRVAHLIQTGTDPFNILVLTFTN
KASKDMRERISKVVGAEAKNIWMGTFHSVFAKILRVEAEKIGYPSNFTIYDTDDSKSVIR
AILKEMQLDDKLYAANFVFNRISSAKNNLISWGEYQANDQIQAEDIQNKRPLIGQIYETY
AKRCFRAGAMDFDDLLFKTNILLKEHPDVLNKYQQKFRYLMVDEYQDTNFSQYTIVKKLA
AAYQNICVVGDDAQSIYAFRGANIQNILNFERDYPDLKVYKLEQNYRSTQNIVDAASSII
ANNKNQLEKNVFSENAEGDRIKVSRAFTDNEEGKLVAEAIIQERSTKGYQHNDFAILYRT
NAQSRAMEEGLRKLNIPYRIYGGQSFYQRKEIKDLIAYFRLTFNPKDEEAIKRVINYPKR
GIGDTSIDKIIVAADQHGKTMWDVISNAHEYVDGRLANQLNDFSMMVQSFQAEAKKLDAY
DTALFIAQHAGILKELYTDDSVEGRARYENIQELLNGIKEFAEREDIEEKGLDIFMQDVA
LLTNDDKDGDKNKDTVSLMTIHSAKGLEFKNVFIVGLEENLFPSQMSLTNRTDLEEERRL
FYVAITRAEIKLTITYATSRYRWGTLTNCEPSRFINEISPKFLELDVKPAKSTSFDGNFD
DDRKSWTSQPRDFISKPKPAAGATTSAPPVRPKTTSLLAKAHVPTPGFTPSQPHEFQGGM
EVEHEKFGFGKIISLEGTLPDVKATVFFQGLGNKQLLLKFAKLMIVK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
ttggattatttagcaggattaaacccacaacaaagagcagcagtagagaacactaaagga
ccggtaatgattgttgcaggtgcaggttcgggcaaaaccagggtaattacctttcgtgta
gcccaccttattcaaaccggtactgatccatttaacattctggttttaacctttaccaac
aaggcgagtaaagatatgcgcgagcgtattagtaaagtggttggtgcagaggcaaagaac
atctggatgggtacttttcactctgtttttgcgaaaattctacgggtagaggccgagaaa
atcggttatccgagcaactttaccatttacgatacggatgatagtaaaagtgtaatccgc
gctattttgaaagaaatgcagctggatgataaattatatgcagcgaatttcgtttttaat
agaatttcatcagctaaaaataatttaatttcatggggcgaataccaggctaacgatcag
atacaggccgaagatattcagaataaacgcccattaattggccagatttacgaaacttat
gctaaacgttgtttcagagcaggcgcaatggattttgatgatttgttgttcaaaaccaat
attttattaaaagaacacccggatgttttaaataaataccagcagaaattcagatacctg
atggtggatgagtaccaggatacaaacttttcgcagtataccattgtgaaaaaattggcc
gctgcttatcaaaacatttgtgtagtgggtgatgatgcacagagtatttatgcgttccgt
ggagcaaacatccagaatattttaaattttgaacgcgattaccctgatttaaaggtttat
aaattagaacagaattaccgttctacccaaaatattgttgatgctgcaagcagtattatt
gccaacaacaaaaaccagctcgaaaagaatgtattttctgaaaatgcagaaggagataga
attaaagtttcgcgtgcgtttaccgataacgaagaaggtaaattagttgccgaagccatt
atccaggaacgcagtacaaaaggataccagcacaacgattttgctatcctataccgtaca
aatgcgcaaagcagggcgatggaggaaggtttacgtaaactgaatattccttaccggatc
tatggcggtcagtctttttaccaacgcaaagagattaaagatttaattgcttatttccgt
ttaacttttaatccgaaggatgaagaggctataaaacgtgtaatcaattaccctaaacgt
ggtattggcgacacttctattgataaaattattgttgcggcagatcagcatggaaaaacc
atgtgggatgtaatttctaatgcacacgaatatgtagacgggcgtttagccaatcaactg
aacgatttttccatgatggtgcaaagcttccaggcagaagcgaaaaagctggatgcttat
gataccgctttgtttattgctcaacatgcaggtattttaaaagaattatacactgatgat
agtgtggaaggacgtgcgagatacgaaaacattcaggaattattaaatggtattaaggaa
tttgcagaacgagaagacattgaagaaaaaggccttgatatttttatgcaggatgttgcc
cttttaaccaatgatgataaagatggtgataaaaataaggataccgtttctttaatgacg
atccactcagccaaaggattggagtttaaaaacgtgtttattgttggattggaagaaaat
ctgtttccatcacaaatgtcgttaaccaaccgcactgatttagaggaagagcgccgttta
ttttatgtagccattacccgtgccgagataaaactaaccataacctatgctacgtcacgt
taccgttggggtacattaaccaactgcgaaccaagtcgtttcattaacgaaattagtccg
aagtttttagagttggatgttaaaccagccaaatcaaccagttttgatggcaattttgat
gatgaccgcaaatcatggacttcacaaccccgcgatttcattagcaaacctaaaccagcg
gctggtgcaactacttctgcaccacctgtccgcccgaaaacaacatcgctattggcaaag
gcacacgtgccaacacctggttttacaccttcacaaccacacgagtttcaaggcggtatg
gaagtggagcacgaaaaattcggtttcggaaaaattatcagcttagaaggaaccttacca
gatgttaaggcaacagtgtttttccagggcttaggcaataaacagttgctgcttaaattt
gcaaaactgatgattgtgaagtaa
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