Pedobacter sp. D749: KYH19_19860
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Entry
KYH19_19860 CDS
T10701
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pev Pedobacter sp. D749
Pathway
pev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KYH19_19860 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pev03019
]
KYH19_19860 (groL)
03110 Chaperones and folding catalysts [BR:
pev03110
]
KYH19_19860 (groL)
03029 Mitochondrial biogenesis [BR:
pev03029
]
KYH19_19860 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pev04147
]
KYH19_19860 (groL)
Enzymes [BR:
pev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KYH19_19860 (groL)
Messenger RNA biogenesis [BR:
pev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KYH19_19860 (groL)
Chaperones and folding catalysts [BR:
pev03110
]
Heat shock proteins
HSP60 / Chaperonin
KYH19_19860 (groL)
Mitochondrial biogenesis [BR:
pev03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KYH19_19860 (groL)
Exosome [BR:
pev04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KYH19_19860 (groL)
Exosomal proteins of other body fluids (saliva and urine)
KYH19_19860 (groL)
Exosomal proteins of breast cancer cells
KYH19_19860 (groL)
Exosomal proteins of colorectal cancer cells
KYH19_19860 (groL)
Exosomal proteins of bladder cancer cells
KYH19_19860 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
QXU44371
LinkDB
All DBs
Position
4861250..4862887
Genome browser
AA seq
545 aa
AA seq
DB search
MMSKQVKYNVEARDALKRGVDILANAVKVTLGPKGRNVIIDKKFGSPAITKDGVTVAKEI
ELKDAVENMGAQMVKEVASKTADIAGDGTTTATVLAQAIITTGIKNVAAGANPMDLKRGI
DKAVAAVVENLKAQSQTVGEDNNKIKQVASISANNDEVIGALIAEAMSKVGKDGVITVEE
AKGTETEVKTVEGMQFDRGYLSPYFVTNADKMEAELENPYILIYDKKISNMKELLPVLEK
TVQTGKPLVIIAEDLDGEALATLVVNKIRGSLKVVAVKAPGFGDRRKAMLEDIAILTGGI
VVSEERGYKLENADLTYLGSAEKVVVDKDNTTVINGAGNSEDIKSRVSQIKSQIETTTSD
YDKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAF
IRAVEALANLKGANEDENTGIQIIRRAIEEPLRQICENAGIEGSIVVQKVKEGTADFGYN
ARTDVYENLIGAGVIDPTKVSRVALENAASIAAMLLTTEVVLADEPEEGGSPMPPMGGGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
ataatgtcaaaacaagtaaaatataacgtagaagcacgcgacgccctgaaaagaggtgtt
gatattcttgcaaatgcagtaaaagtaacattaggcccaaaaggccgtaacgtaattatc
gataaaaaattcggttcaccagcaatcactaaagatggtgttacagtagcgaaagaaatc
gaattgaaagatgctgttgagaacatgggtgctcaaatggttaaagaagtagcttcaaaa
acagctgatattgctggtgatggtacaactacggctactgtattggctcaggcaattatc
actacaggtattaaaaacgttgctgcaggtgcaaacccaatggatttaaaacgtggtatt
gataaagctgttgctgctgttgtagaaaacttaaaagcacaatcgcaaactgtaggtgaa
gacaacaataaaatcaaacaagttgcgtctatctctgctaacaacgatgaagtaatcggc
gcgttaattgctgaggcaatgagcaaagttggtaaagatggtgtaattactgttgaagaa
gcaaaaggtactgaaactgaagttaaaacagtagaaggtatgcaatttgacagaggttac
ttatctccatattttgtgactaacgcagataaaatggaagctgaattagaaaatccttac
attttaatctacgacaaaaaaatcagcaacatgaaagaattgttgcctgttttagaaaaa
actgttcaaactggtaaaccattagtcatcattgctgaagatttagatggcgaagcttta
gctactttagtagttaataaaatccgtggttcattgaaggttgtagctgttaaagctcca
ggttttggtgacagaagaaaagcgatgttagaagacatcgcgatcttaaccggcggtatt
gtagtatcagaagaaagaggttataaattagaaaatgctgatttaacttacttaggttct
gctgagaaagttgttgttgataaagacaatacaactgtaatcaatggtgctggtaactca
gaagatattaaatctcgtgttagccagattaaatctcagatcgaaacgactacatctgat
tacgacaaagaaaaattacaagagcgtttggctaaattggctggtggtgttgcagttctt
tatgtaggtgcagctagtgaagttgaaatgaaagagaaaaaagaccgtgttgatgatgct
ttacatgcaacccgtgcggctgtagaagaaggtattgttgctggtggtggtgttgctttt
atccgtgctgttgaagctttagcaaacttaaaaggtgctaatgaagatgaaaacactggt
atccagatcatccgtcgcgctattgaagagccactacgtcaaatttgcgaaaacgcaggt
attgaaggttctatcgtagttcaaaaagttaaagaaggtacagccgatttcggttataat
gcacgtactgatgtttacgaaaacttaattggagcaggtgttattgacccaactaaagta
agccgtgtagccttagaaaacgcagcatctattgcagcgatgttattaactacagaagtt
gttttagcagacgaacctgaagaaggtggttctccaatgcctccaatgggcggcggcggt
atgggtggtatgatgtaa
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