Pedobacter sp. D749: KYH19_19990
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Entry
KYH19_19990 CDS
T10701
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pev Pedobacter sp. D749
Brite
KEGG Orthology (KO) [BR:
pev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pev03016
]
KYH19_19990 (miaB)
Enzymes [BR:
pev01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
KYH19_19990 (miaB)
Transfer RNA biogenesis [BR:
pev03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
KYH19_19990 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QXU41254
LinkDB
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Position
complement(4889124..4890539)
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AA seq
471 aa
AA seq
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MIDLQVQDKTHDEARQGEALILDTPIKADARKLYIESYGCAMNFADSEIVASILSETGFE
TTGDYHQADVIFINTCSIRENAETRVRNRLSQFGVEKRRNPKLIVGVLGCMAERLKSKFL
EEERLVDVVVGPDAYRDLPNLIEQVESGHKAVNVLLSREETYADISPVRLNSNGITAFIS
ITRGCNNMCSFCVVPFTRGRERSRDAHSIIEEARGLFEAGYREVTLLGQNVDSYTWTSED
GTETVNFAQLLEQTALVSPDLRVRFSTSHPKDITDEVLHTIAKYDNICNYIHLPVQSGNT
RILELMNRTYTREWYINRIDAIRNIIPGCAISTDIIAGFCTETEEEHEETLSMMDYVQYD
FAYNFTYSERPGTLAARKLEDDIPEEVKKRRLAEILAKQQAHSLMRLQEWVGKTVRVLIE
GTSKKSDLDYCGRGDSGAMAIFPAIDGVKPGQYANVYIEKCTSATLIGKIV
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgattgatttacaagtacaggataagacgcacgatgaagcaaggcaaggtgaagcttta
attttagacaccccgattaaagccgatgcccgtaaattatatatcgaaagttacggttgt
gcgatgaattttgctgatagtgaaattgttgcctctattttatcagaaactggatttgaa
acgacaggggattatcatcaggccgatgtaatcttcattaatacctgttcgatccgcgaa
aacgcagaaacgagggttagaaaccgactatcgcagtttggtgtcgaaaaacgccgcaac
ccgaaattaattgttggggttttgggctgcatggcagaacgtttaaaatctaaatttttg
gaagaagaacgtttggttgatgtagtagttggccctgatgcttatcgcgatctgcctaac
ttaattgagcaggtagaaagcgggcataaagcagttaatgttttattatcccgcgaggaa
acctatgctgatattagtccggttcgtttaaacagcaacggtataaccgctttcatttcc
attacccgtggttgtaataacatgtgctctttctgtgtggttccttttacccgcggccgc
gaacgaagccgcgatgcccattctattatagaagaagcgaggggcttatttgaagctggt
taccgggaggttacacttttgggccaaaacgtagattcgtacacctggacatcagaagat
ggaacagaaactgtaaattttgcgcagcttttggagcaaacagcattggttagtccggat
ttaagggtgcgtttctctacttcacatccaaaagatattaccgacgaagttttgcatacc
attgctaaatacgataacatctgtaattatatccacttgcctgtccaatcaggtaatacc
cgcatattggagttaatgaacaggacttatacccgcgaatggtatatcaatcgtattgac
gccatccgcaacattattccgggttgtgcaatttctaccgatatcatcgcaggtttctgt
acagaaactgaagaggaacacgaggaaaccctgagcatgatggattatgtgcaatatgat
tttgcctataacttcacttattctgaaagaccaggaactttagccgcccgtaaattggaa
gatgatattcctgaggaagtgaaaaaacgccgtttggctgagattttggccaaacaacag
gcacattcgttaatgcgtttgcaagaatgggtgggtaaaactgttcgggttttgattgaa
ggcacttctaagaaatctgatctcgattattgcggaagaggagatagcggagcaatggcg
attttccctgcaattgatggcgttaaaccaggtcagtatgcaaatgtgtatatcgagaaa
tgtacatctgctacgttaattggtaaaatagtttaa
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