Pedobacter sp. D749: KYH19_22105
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Entry
KYH19_22105 CDS
T10701
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pev Pedobacter sp. D749
Pathway
pev00521
Streptomycin biosynthesis
pev00523
Polyketide sugar unit biosynthesis
pev00525
Acarbose and validamycin biosynthesis
pev00541
Biosynthesis of various nucleotide sugars
pev01100
Metabolic pathways
pev01110
Biosynthesis of secondary metabolites
pev01250
Biosynthesis of nucleotide sugars
Module
pev_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pev00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KYH19_22105 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KYH19_22105 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
KYH19_22105 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KYH19_22105 (rfbB)
00525 Acarbose and validamycin biosynthesis
KYH19_22105 (rfbB)
Enzymes [BR:
pev01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
KYH19_22105 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
NAD_binding_10
DUF2532
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
QXU41660
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Position
5372456..5373508
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AA seq
350 aa
AA seq
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MKKILITGGAGFIGSHVVRRFVNNYPQYEIVNLDKLTYAGNLANLTDIENKPNYRFVKQD
ITDANAMFDLFKTEDFDAVIHLAAESHVDRSISDPTAFVITNVIGTVNLLNAAREYWKDN
YDKKRFYHVSTDEVYGALGEEGMFTETTAYDPHSPYSASKASSDHFVRAYHDTYGMDCVI
SNCSNNYGSHHFPEKLIPLAINNIKNNKAVPVYGKGENVRDWLWVEDHARAIDVIFHNSK
TGDTYNIGGHNEWKNIDLINLLCTIMDQKLGREVGESAKLITYVTDRAGHDLRYAIDSSK
LQNQLDWVPSLQFEEGLAKTVDWYLQNEDWLNNVTSGNYQSYYKQQYSNK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaatcttaatcaccggtggtgcgggctttataggctctcatgtagttcgtcgt
tttgtaaataactaccctcaatatgaaattgtcaatttagacaaacttacctatgctggt
aacctggctaatttaactgatatcgaaaataagccaaattatagatttgtaaaacaagat
attacggatgctaacgcgatgttcgatctgtttaaaacagaagattttgatgccgtgata
caccttgcagcagaaagccatgtagatcgatcgatcagcgatccaacagctttcgtaatt
accaatgtaatcggcacagtaaatttattaaatgctgcccgcgaatactggaaagataat
tatgacaaaaaacgtttttaccatgtaagtaccgatgaggtatatggtgctttaggtgaa
gaaggcatgtttaccgaaactactgcttatgatccacatagcccctattcagcatcgaaa
gccagttcagatcatttcgtaagggcatatcacgatacttatggtatggattgtgtgatt
tccaattgctcaaacaattatggttctcatcattttccagagaagctgattccattggcg
atcaataacattaaaaataataaagctgtacctgtttatggtaaaggtgaaaatgtgcgc
gattggttatgggtggaagaccacgccagggcaatagacgtaattttccacaattcgaaa
accggggatacttacaatatcggtggccataacgaatggaagaatatcgatctgatcaat
ttgctttgtacaataatggatcaaaaactaggacgtgaggtgggtgaatcggccaaattg
ataacttatgttaccgatcgtgcaggtcatgatttgcgttacgcaatcgattccagtaaa
ctacaaaatcaattagattgggtgccgagcttacagtttgaagaggggctggctaaaaca
gtagactggtatctgcaaaatgaagattggttaaacaatgtaacttctggtaattatcaa
tcctattacaaacaacagtacagcaacaaataa
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