Pedobacter sp. D749: KYH19_23775
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Entry
KYH19_23775 CDS
T10701
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pev Pedobacter sp. D749
Pathway
pev03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
pev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KYH19_23775 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KYH19_23775 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
Viral_helicase1
AAA_23
SSrecog
Poty_PP
Motif
Other DBs
NCBI-ProteinID:
QXU41961
LinkDB
All DBs
Position
5772886..5775810
Genome browser
AA seq
974 aa
AA seq
DB search
MSNKSIDLGEQKDVEVYGARVHNLKNIDVSFPRNQLVVITGLSGSGKSSLAFDTIYAEGQ
RRYMETFSAYSRQFMGGMERPDVDKVSGLSPVIAIEQKTTSKNPRSTVGTITEIYDFMRL
LYARVADAYSYNTGEKMERMSEDQILQNIFNKFDGMAVNILAPVVKGRKGHYRELFEQIR
KQGYVKVRVDGEIKDIAAKMQVDRYKIHDIEVVIDRLIIDVKDKKRLLDSLQIAMKMGKG
VIKISDKDNNVAHFSKFLMCPTTGISYDEPQPNSFSFNSPYGACERCDGLGYIFVVDKDS
VIPNPKLSILNGGLAPLGEYRDIWMFQVLKALAKKYSFSLSTPIEKLSDEVINIILSGSP
DLIKVEVEYNKWNVQNYNITFDGIIKMLEEQNEKRSESASDDMDEFRKLKTCPECHGARL
KKESLNFKVDGKNIFELSSMDINNLHQWFEKVDERLSDRQNIIAKEILKEIKARIGFLTD
VGLTYLTLDRTARTLSGGEAQRIRLATQIGSQLMNVMYILDEPSIGLHQRDNERLINALK
NLRDLGNTVLVVEHDKDMILEADWVIDVGPGAGIHGGTVVAEGTAAQILKSNTLTADYLN
GKKQIETPKVRRKGNGHKLSIVKATGHNLKEVSVDFPLGKFIAVTGVSGSGKSSLITETL
YPILNHHFFRAKKTPLPYEKINGLKEIDKVIEIDQAPIGRTPRSNPSTYTGVFSDIRNLF
VQLPEAKIRGYKPGRFSFNVKGGRCETCQGAGLKVIEMNFLPDVQVPCEECGGRRYNRET
LEVRFRGKSISDVLDMSIEDACTFFENIPIIYRKIKTLKDVGLGYITLGQSSVTLSGGEA
QRVKLATELSKKDTGKTFYILDEPTTGLHFEDINVLLGVLQELVDKGNTILVIEHNLDVV
KVADWVIDLGEEGGAGGGRILFEGTPEGLIQNPISLTGKFLKKEMEWIPQNGKSEVGSPE
SKVKAPKKSKAEKK
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaatctatcgacctcggcgagcaaaaagatgtagaagtatatggtgcgagg
gtacataatttaaagaatatagacgttagttttccgcgcaatcaactggttgtaatcact
ggtttaagtggcagcggtaaatcttcgttggcttttgataccatttatgcggaaggacag
cgccgttacatggaaacattcagtgcctatagccgccagtttatgggcggtatggagcgc
ccggatgtggataaagtttcgggactaagtccggttattgccattgagcaaaaaaccacc
agtaaaaatccacgttcaaccgtgggtacaattaccgaaatttacgattttatgcgtttg
ctttatgcgcgtgttgccgatgcctattcgtataataccggtgagaaaatggagcgcatg
agcgaagaccagattctgcagaacatcttcaataaatttgatggtatggccgtaaatatc
cttgccccggtagttaaaggcagaaaggggcattaccgcgaactttttgagcagatccgt
aaacagggttatgtgaaagtgcgtgtagatggggaaattaaggatattgctgctaaaatg
caggtagaccgttataaaatccatgatattgaagtggtgatcgatcgcctgattattgat
gtgaaagataaaaaacgcctgctcgattcactgcagattgcaatgaaaatgggtaaaggg
gtaatcaaaatcagcgataaagataataatgtagcacattttagtaagtttttgatgtgc
ccaactacagggatttcttatgatgaaccccaacccaatagtttttcgttcaactcacct
tatggcgcctgtgagcgttgcgatggtttagggtatatttttgtagtcgataaagattcg
gttatcccaaatccaaaattgagtattttaaatggtggtttggctcctttgggcgaatat
cgcgatatctggatgttccaggtattaaaagctttggcaaaaaaatacagcttctcgctt
tctacgcccattgaaaaattaagcgatgaggtcattaacatcattttaagcggttcaccc
gacctgattaaggttgaggtagaatacaataaatggaacgttcagaattataacatcact
tttgacgggataattaaaatgctcgaagagcagaacgaaaaaagaagcgaatcagcatct
gacgatatggacgagttcaggaaactaaaaacctgtccggagtgtcacggtgcacgtttg
aagaaagaaagtctgaattttaaggtagatggcaaaaacatttttgaactgtcatcaatg
gatatcaacaaccttcatcaatggtttgaaaaagttgatgaacgtttgtccgaccgtcag
aatatcattgccaaagaaattttaaaggaaattaaagcgagaatcggctttttaaccgat
gtgggtttaacttatttaactttagatagaactgcccgtacactttctggtggtgaggca
caacgtatccgtttggctacgcagatcggttcgcagctgatgaacgtcatgtacattcta
gatgagccaagtatcggtttacaccagcgtgataacgaacgtttgattaatgcacttaaa
aatctccgcgatcttggaaacaccgttttggtggtagaacatgataaggatatgatttta
gaggccgattgggtaattgatgtggggcctggtgccggtattcatggaggtaccgttgta
gccgaaggaacagccgcacagattctgaaatcgaataccttaaccgctgattatttgaat
ggcaaaaagcagattgaaacaccaaaagtccgcaggaaaggtaacgggcataaattgtcg
attgttaaagctacgggccataatttaaaagaggtttcagtagattttcctttgggaaaa
tttattgccgtaaccggtgtttctggtagtggtaaatcaagtttaattaccgaaacttta
tatcctattttaaaccaccattttttcagggccaaaaaaacacctttgccttacgaaaaa
attaatggcttaaaagaaatagataaggtaatcgagattgatcaggcaccgattggcaga
acgccgcgttcaaatccttcaacctataccggcgttttctctgatatcaggaatttgttt
gttcagttgcccgaagcaaaaattcggggttacaaaccaggccgtttttctttcaacgta
aaaggtggtcgttgcgaaacctgtcagggtgcaggtttaaaggtgattgaaatgaacttt
ttgcccgatgtacaagttccttgtgaagagtgcggcggaagaagatacaacagggagact
ttagaagtccgtttccgtggaaaatcgatcagtgatgtgttggatatgagtattgaagat
gcctgtactttcttcgaaaatattccgatcatctacagaaagatcaaaaccttaaaagat
gttggtttaggttatattactttgggccaatcgtcggttactttatcaggaggggaggcg
cagcgtgtaaaactggccactgaactttctaaaaaagataccggaaaaaccttttatatt
ttagatgagcctacaacaggacttcactttgaagatattaacgtgcttttgggcgtattg
caggagctggttgataaaggaaataccattttggtgatcgaacataatttagacgtggtt
aaagttgccgattgggtaattgatttaggagaagaaggcggtgctggcggcggaagaatt
ttgtttgaaggtacaccggaaggtttgatccagaacccgatcagtttaaccgggaaattt
ttgaaaaaggaaatggaatggattccgcagaatggaaagtctgaagtcggaagtccggag
tccaaagtcaaagcaccgaaaaaaagcaaagctgaaaagaaatag
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