Paraburkholderia edwinii: KZJ38_00555
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Entry
KZJ38_00555 CDS
T07588
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pew
Paraburkholderia edwinii
Pathway
pew00300
Lysine biosynthesis
pew00470
D-Amino acid metabolism
pew01100
Metabolic pathways
pew01110
Biosynthesis of secondary metabolites
pew01120
Microbial metabolism in diverse environments
pew01230
Biosynthesis of amino acids
Module
pew_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KZJ38_00555 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KZJ38_00555 (dapF)
Enzymes [BR:
pew01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KZJ38_00555 (dapF)
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Motif
Pfam:
DAP_epimerase
Hexokinase_2
CitF
Motif
Other DBs
NCBI-ProteinID:
QYD68930
UniProt:
A0ABX8UNS3
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All DBs
Position
1:130929..131798
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AA seq
289 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGFTRPVNLTAAHVRALANRHFGIGADQLLLVEKPTVDGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRDTGLTDARSVRVQVPNGVITLTMQENGEVTVDM
GTPIFEPARVPFDASGLDGEHQPRREGADTLWPIDVNGATRWVSVVSMGNPHAVQVVDDV
EAFPVTTDGPVIESHPRFPQRVNAGFMQIVARNEIRLRVYERGAGETLACGTGACAAVAA
GVRRGLLDSPVTVHTHGGVLTISWAGGDAALLMAGPAATVFEGEIELAD
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaattcaccaagatgcatggcgcgggcaacgattttgtcgtgctcgacggc
tttacgcggcccgtcaacctgacggccgcgcacgtgcgcgcgctcgcgaaccggcatttc
ggcattggcgcggaccagttgctgcttgtcgaaaagccgaccgtcgacggcgtcgatttc
cgctatcgcatctttaactgcgacggcggtgaggtcgagcattgcggcaacggcgcgcgc
tgcttcgtcaagttcgtgcgcgacacgggtctgaccgacgcacgcagcgtgcgcgtgcag
gtgccgaacggggtcatcacgctgacgatgcaggaaaacggcgaggtgaccgtcgatatg
ggcacgccgatattcgagccggcacgtgtgccattcgacgcgagcggccttgacggtgaa
catcagccgcgccgcgaaggcgccgacacgctctggccgatcgacgtgaacggcgcgacg
cgctgggtgtcggtggtgtcgatgggcaatccgcacgcggtgcaggtcgtcgacgatgtc
gaggcttttccggttaccaccgacggtcccgtcatcgaatcgcatccgcgctttccgcag
cgcgtgaacgcggggttcatgcagatcgtcgcgcgcaacgagatcaggctgcgcgtctac
gaacgcggcgccggcgagacgctcgcgtgcggcacgggcgcgtgcgcggcggtggccgcg
ggcgtgcggcgcggcttgctggactcgcccgtcactgtgcacactcacggcggcgtgctg
accatctcgtgggccggcggcgatgcggcgctgctgatggcgggcccggctgcaacggtg
ttcgagggcgagatcgagctcgccgactga
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