Paraburkholderia edwinii: KZJ38_01240
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Entry
KZJ38_01240 CDS
T07588
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pew
Paraburkholderia edwinii
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pew03032
]
KZJ38_01240 (gyrB)
03400 DNA repair and recombination proteins [BR:
pew03400
]
KZJ38_01240 (gyrB)
Enzymes [BR:
pew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KZJ38_01240 (gyrB)
DNA replication proteins [BR:
pew03032
]
Prokaryotic type
DNA Topoisomerases
KZJ38_01240 (gyrB)
DNA repair and recombination proteins [BR:
pew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KZJ38_01240 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QYD69054
LinkDB
All DBs
Position
1:complement(293959..296430)
Genome browser
AA seq
823 aa
AA seq
DB search
MSELNHTQPDNSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGYCDDIHVTIHADNSVSVIDNGRGIPTGLKMDDKHDPKRSAAEIVMTELHAGGKFDQNS
YKVSGGLHGVGVSCVNALSSWLRLTVRRDGKKHFMEFHRGVPQNRVIENVDGERVSPIPV
MGDTENRGTEVHFMADESIFGTVEYHYDILAKRIRELSFLNNGVRIRLTDLRSGKEDDFA
FGGGVKGFVEYINKTKSVLHPTIFHIVGEKDGVGVEVAMQWNDSYNENVLCFTNNIPQRD
GGTHLTGLRAAMTRVINKYITDQEIAKKAKVETSGDDMREGLSCVLSVKVPEPKFSSQTK
DKLVSSEVRAPVEEVVAKALEEFLLETPNDAKIICGKIVDAARARDAARKAREMTRRKGV
LDGVGLPGKLADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKAR
YDKLLSSEQIVTLITALGCGIGKEDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQ
MPEMIERGYIYIAQPPLYKVKAGKDERYLKDAAELNAHMLRLALNGSELIASEGATPIAG
DALGELARSYLLAQAVVERLSKLYDANALEAVMDGVTIDLSNEASTEASAKAIEAKLRDD
ALKPEVSVYPMYDPVRELRSLRVERRHHGNLKLSVIDEEFQLTADYQQLVNTANTFKGLI
GVGAVIKRGERSMAVTDFKSAMKWLIADAERNVSKQRYKGLGEMNPEQLWETTMDPNVRR
LLRVQIEDAIAADGIFTTLMGDEVEPRRAFIESNALRAGNIDV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactgaaccatacccaacccgataacagctacggcgcctcgtcgattcagatc
ctggagggtctggaggcggtgcgcaagcgaccgggtatgtacattggcgacacgtcggac
gggaccggtctgcaccacctcgtattcgaggtactcgacaattcgatcgacgaagcgctg
gccggatattgcgacgatattcacgtaacgattcacgccgataactcggtttcggttatc
gataatggccgcggcattccgaccggcctgaagatggacgacaagcacgatccgaagcgc
agcgcggcggaaatcgtgatgaccgaattgcacgccggcggcaagttcgatcagaacagc
tataaggtgtcgggcggcttgcacggcgtgggcgtgtcgtgcgtgaacgcgctttcgtcg
tggctgcgtctgaccgtgcgccgcgacggcaagaagcactttatggagtttcaccgcggc
gtaccgcagaaccgtgtgatcgagaacgtggatggcgagcgcgtttcgccgattccggtg
atgggcgatacggaaaatcgcggtaccgaagtgcactttatggccgatgagtcgatcttc
ggcacggtcgaataccactacgacattctggccaagcgcattcgcgagttgtcgttcctc
aataacggcgtgcggatccggttgacggatctgcgctcgggtaaggaagacgattttgcg
tttggcggcggcgtgaaaggctttgttgagtacatcaacaagaccaagagcgtgctgcat
ccgacgatttttcatatcgtcggcgagaaggatggcgtgggcgttgaagtggctatgcag
tggaacgatagctacaacgagaacgtgctctgcttcacgaacaatattccgcagcgcgat
ggcggcacgcatttgacgggtttgcgtgcggcgatgacgcgggtgattaacaagtacatc
accgatcaggaaattgccaagaaggcgaaggttgagacgtccggcgacgatatgcgcgaa
gggctttcgtgcgtgttgtcggtgaaggtgccggagcctaagttcagttcgcagactaag
gacaagctggtttcttctgaggtgcgtgcacctgttgaagaagtggtggctaaggcgctt
gaagagtttctgctcgagacgccgaacgacgcgaagattatttgcgggaagattgttgat
gctgcgcgggcgcgcgatgcggcgcggaaggcgcgtgagatgacgcgtcgtaaaggcgtg
ctggatggcgttgggctgcctgggaaactcgcggattgccaggagaaggatccggctaag
tcggaaatctacatcgttgagggtgactcggcgggtgggtcggctaagcaaggacgcgat
cggaagttccaggcgattttgccactgcgtggcaaggtgctaaatgttgagaaggctcgg
tatgacaagcttttgtcttccgagcagatcgttacgctgattactgcgctgggttgtggc
atcggcaaggaagactacaacctcgataagcttcggtatcaccgcatcatcatcatgacc
gacgctgacgtcgatggtgcgcacatccggaccctgctgctgacgttcttttatcggcag
atgccggagatgatcgagcgcgggtatatctatatcgcgcagccgccgctttataaggtt
aaggcgggtaaggatgagcggtatcttaaggatgcggcggagcttaatgctcatatgctg
cggttggcgttgaatgggtcggaactgattgcttcggaaggggctacgccgattgctggg
gatgcgcttggtgaactcgctcgttcgtatttgcttgcgcaagcggtggttgagcggttg
agcaagctgtatgacgccaatgcgcttgaagccgtgatggatggggtcacgattgacctt
tctaatgaggcttctacggaggcttcggctaaggcgattgaggcgaagctgcgggatgat
gcgctcaagcctgaggttagcgtgtatccgatgtatgacccggtgcgtgagctgcgctcg
ctaagggttgagcggcggcatcacgggaacctgaagctttcggttattgatgaagagttt
cagttgaccgcggattatcagcagctggtcaatacggcgaatacgtttaaggggttgatt
ggggttggtgctgtcatcaagcgtggtgagcgcagcatggctgtaactgactttaagagc
gctatgaagtggctcatcgctgacgctgagcgtaatgtttcgaagcagcggtataagggt
ctcggtgagatgaatcctgagcagctttgggagacgacgatggatccgaatgtgcggcgg
ttgttgcgagtgcagattgaagacgcgattgccgcggacgggatttttacaaccctgatg
ggggacgaagttgagccccgcagggcattcatcgaatccaatgcattgcgtgccggaaac
atcgacgtttaa
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