Paraburkholderia edwinii: KZJ38_04325
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Entry
KZJ38_04325 CDS
T07588
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pew
Paraburkholderia edwinii
Pathway
pew03030
DNA replication
pew03430
Mismatch repair
pew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KZJ38_04325 (holA)
03430 Mismatch repair
KZJ38_04325 (holA)
03440 Homologous recombination
KZJ38_04325 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pew03032
]
KZJ38_04325 (holA)
03400 DNA repair and recombination proteins [BR:
pew03400
]
KZJ38_04325 (holA)
Enzymes [BR:
pew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KZJ38_04325 (holA)
DNA replication proteins [BR:
pew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KZJ38_04325 (holA)
DNA repair and recombination proteins [BR:
pew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KZJ38_04325 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QYD69595
LinkDB
All DBs
Position
1:979660..980820
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AA seq
386 aa
AA seq
DB search
MQLRLDALEPHLTKGLAGLYVVYGDEHLLAQEACDRIRAAARAAGFTDRNVFTVERGFDW
SSLLGASQSMSLFGDKQLVELRIPTGKPGKEGAEALKTLADAANPDVLTLITLPRLDAAT
QKAGWFTTLADAGVALKIDPVERAQLPNWIGQRLALQQQRVAPGDEGRRALQFMGERVEG
NLLAAHQEIQKLGLLYPAGVLTFEQIHDAVLNVARYDVFKLNEAMLAGDVGRLSRMLDGL
RGEGEAAVLVLWAVVEEIRTLLRIKRGVAAGKPLAMLLRENRVWGPRERLVGPALSRVTE
RALEKALSLAARLDRQVKGLSGSAPGSRRAGDPPPDPWAGLFELAMTVAAAPAPSAGKGA
GPAGGSPRVPPAGRPAPAGAVGRRPS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgacttgacgcgcttgaaccgcatctgacgaaagggctcgctggcctgtat
gtcgtgtatggcgacgagcatctgctcgcgcaggaagcctgcgatcgcattcgcgcggct
gcgcgcgcagcgggctttacggaccgcaatgtgttcacggtcgagcggggctttgactgg
agttcgctgcttggggcgagtcagtcgatgtcgttgtttggtgacaagcaactggtcgaa
ctgcgtattccgaccggcaagcccggcaaagaaggcgccgaagcgctgaagacgctggcc
gacgctgcaaatccggatgtgctgacgcttatcacgctgccgcggctcgatgcggcgacg
cagaaggctgggtggttcaccacgcttgccgatgcaggtgttgcgttgaagatcgatcct
gtcgaacgcgcgcagctgccgaactggatcgggcagcggctcgcgcttcagcagcagcgc
gtagcgcccggcgatgaaggacggcgtgcgctgcagtttatgggcgagcgcgtcgaaggg
aatctgctggctgcgcatcaggagattcagaagcttgggctgctgtatccggccggtgtg
cttacgttcgagcagattcacgacgcggtgctcaacgtcgcgcgctacgacgtgttcaag
cttaacgaggcgatgctggccggcgacgtcggccgcttatcgaggatgctcgacggcctg
cgcggcgaaggcgaggccgcggtgctcgtgctgtgggcggtggtcgaagagatacggaca
ctgctgcgcatcaagcgcggtgtcgccgcgggcaagccgctcgcgatgctgctgcgcgaa
aaccgcgtgtgggggccgcgcgagcggctcgtcggacctgctctatcgcgtgtgaccgag
cgcgcactggagaaggcgctgagcctggccgcgcggctggatcggcaagtgaaaggctta
tcgggaagcgcgcccggcagtcgtcgcgctggcgatccaccgcctgatccatgggcagga
ttgttcgaactcgcaatgacagtagccgcagctccagcaccgagcgcgggaaaaggcgcg
ggcccggccggcggctcgccgcgtgtgccgccagccgggcgaccggcgcccgcgggggcg
gtcgggaggcggccgtcgtag
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