Paraburkholderia edwinii: KZJ38_08035
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Entry
KZJ38_08035 CDS
T07588
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pew
Paraburkholderia edwinii
Pathway
pew02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KZJ38_08035 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pew02000
]
KZJ38_08035 (msbA)
Enzymes [BR:
pew01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
KZJ38_08035 (msbA)
Transporters [BR:
pew02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KZJ38_08035 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA
AAA_16
AAA_30
AAA_22
AAA_29
RsgA_GTPase
AAA_25
AAA_24
AAA_28
TsaE
AAA_33
Zeta_toxin
AAA_21
AAA_18
PRK
Motif
Other DBs
NCBI-ProteinID:
QYD70234
UniProt:
A0ABX8UMZ9
LinkDB
All DBs
Position
1:1808432..1810225
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AA seq
597 aa
AA seq
DB search
MSEKPTLSKPIGTGQASSAVNVWRKLWPYLKPLFWVVVGAIVAMAASAATDAAIPALLKP
LLDHGFGEHGSDRAKWFVPMAIIGLALVRSTSQYASGYLLAYVSNRVLLDLRLKMFERMI
HTSVAFFQRETASTVINAIVFEVNQILNVLLGVLVTLVRDSLTVLFLLGYLFYLNWRLTL
IVAVLLPTIGWLVGKINRRLRRLNREHQLLTNELSYIVEETVGGYKVVKVHNGEQYEMDR
FTEMSKRLRGYSMRMQVSGGLAQPLTQFLASIALAVVVTIAVVQSTSDQTTVGGFVAFVT
SMLLIISPLKHLMDVNQPLQRGMTAAELIFGLIDEPPEPAGGGLPLDRASGEIEFRDVSF
AYGTSGPMQRQTLEQVSFKVAPGEMIALAGPSGSGKTTLVNLLPRFFDPSGGEVLVDGVA
LPEYGIHALRSQIAMVSQDVVLFNDTIASNVAYGQTPDRERVVSALRAANLWDTVEAMAN
GIDTLVGDNGMMLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQSALETLMK
GRTTLVIAHRLSTIERADRILVMEAGRIAERGTHRELLMQNGLYAHLHRIQFQQNAA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaaaagcctacgttaagcaaaccgatcggaacgggtcaggcgtcgtccgcagtg
aacgtatggcgcaagctttggccttacctgaagccgctcttctgggtcgtcgtcggggcg
atcgtcgcgatggccgcgagcgccgccaccgatgccgccattcccgccttgctcaagccg
ctgctcgatcacggtttcggcgagcacggcagcgaccgcgcgaaatggttcgtgccgatg
gcgatcattggcctcgcgctcgtgcgcagcacgtcgcaatacgcgtcgggctatctgctc
gcgtatgtgtcgaaccgcgtgctgctcgatctgcggctgaagatgttcgaacgcatgatc
cacaccagtgtcgcgttcttccagcgcgagacggcgagcaccgtgatcaacgcgatcgtg
ttcgaggtcaaccagatcctgaacgtgctgctgggcgtgctcgtcacgctcgtgcgcgat
tcgctgaccgtgctgttcctgctcggctacctgttctatctgaactggcgcctcacgttg
atcgtcgcggtgctgctgccgaccatcggctggctggtcggcaagatcaaccggcgcctg
cggcgcctgaaccgtgagcatcagctgctgacgaacgaactgtcgtacatcgtcgaagaa
acggtcggcggttacaaggtcgtgaaggtgcataacggcgagcagtacgagatggaccgc
ttcaccgaaatgagcaagcgcctgcgcggctattcgatgcggatgcaggtgtcgggcggc
ctcgcacagccgctcacgcagtttctcgcgtcgatcgcgctggccgtggtggtgaccatc
gccgtggtgcaatcgacgtccgaccagacgacggtcggcggcttcgtcgcgttcgtcaca
tcgatgctgctgatcatctcgccgctcaagcatctgatggacgtcaaccagccgctgcag
cgcggcatgacggccgcggaactgatcttcgggctgatcgacgagccgcccgagccggcc
ggcggcggcttgccactcgaccgcgcgagcggcgagatcgagttccgcgacgtgtcgttc
gcgtatggcacgagcgggccgatgcagcgtcagacgctcgagcaggtctcgttcaaggtt
gcgccgggcgagatgatcgcgctcgcggggccgtcgggcagcggtaagaccacgctcgtg
aatctgctgccgcgctttttcgatccgtcgggcggcgaggttctcgtcgatggcgtggcg
ttgcccgaatatggcattcacgcgctgcgcagccagatcgcgatggtgagccaggatgtc
gtgctcttcaacgacacgatcgcgagcaacgtcgcgtatgggcaaacgcccgatcgtgag
cgcgtcgtatcggcgctgcgcgcggcgaacctgtgggataccgtcgaagcgatggcgaac
ggcatcgatacgctggtcggcgacaacggcatgatgctgtcgggcggccagcgccagcgg
cttgcgatcgcgcgcgcgatctacaaggatgcgccgatcctgatcctcgacgaagcgacc
tcggcgctcgattccgaatcggagcgccatgtgcagtcggcgctcgaaacgctgatgaaa
ggccgcacgaccctcgtgatcgcgcaccggctgtcgacgatcgagcgcgcggaccgcatt
ctcgtgatggaggcggggcgcatcgccgaacgcggcacgcaccgcgaactgctgatgcag
aacgggctctatgcgcatctgcatcggatccagttccagcagaacgccgcgtga
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