Paraburkholderia edwinii: KZJ38_12915
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Entry
KZJ38_12915 CDS
T07588
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pew
Paraburkholderia edwinii
Pathway
pew03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KZJ38_12915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pew03400
]
KZJ38_12915
Enzymes [BR:
pew01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KZJ38_12915
DNA repair and recombination proteins [BR:
pew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KZJ38_12915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PdxA
Motif
Other DBs
NCBI-ProteinID:
QYD67278
LinkDB
All DBs
Position
1:2924407..2925054
Genome browser
AA seq
215 aa
AA seq
DB search
MSARNEDDQNGTPEVDPQQQPARLDACRRCALWHDATQAVPGAGPRHAPIMMVGEQPGDS
EDRAGKPFVGPAGQLLDNALDEAGVTRTDVFVTNAVKHFKWEPRGKRRMHKTPAQREIAA
CHYWLEKELSTVEPVVVVALGATALKALLETRDAPLREVIGKVLEHGARQVVPTWHPSFA
LRAPDRATRERVYADIVKALREAGQIAHDAAKRRR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgcaacgaggatgaccagaacggcacgcccgaggtcgacccgcagcaacag
ccggcgcgcctcgatgcgtgccgtcgctgcgcgttgtggcacgacgcgacgcaggcggtg
cccggcgccgggccgcgccatgcgccgatcatgatggtcggggagcaaccgggcgacagc
gaggaccgcgccggcaaaccgttcgtcgggccagccgggcaactgctcgacaatgcgctc
gatgaagccggcgtcacacgcacggacgtcttcgtgacgaacgcggtcaagcacttcaag
tgggaaccgcgcggcaagcggcgcatgcacaagacacccgcgcaacgcgagatcgccgcc
tgtcactactggctggaaaaggaattgtcgacggtcgagccggtcgttgtggtggcgctc
ggcgcgaccgcgttgaaagcgctgctcgaaacgcgcgatgcgccgctgcgcgaggtgatc
ggcaaggtgctcgagcacggcgcgcgccaggtcgtgccgacctggcacccgtcgttcgca
ctgcgcgcccccgatcgcgcaacgcgcgagcgcgtctatgcggatatcgtgaaagcgctt
cgggaagccggccagatcgcgcacgatgccgcgaagcgtcggcgctaa
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