Paraburkholderia edwinii: KZJ38_13480
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Entry
KZJ38_13480 CDS
T07588
Name
(GenBank) pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
pew
Paraburkholderia edwinii
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pew03009
]
KZJ38_13480
Enzymes [BR:
pew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
KZJ38_13480
Ribosome biogenesis [BR:
pew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KZJ38_13480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QYD67381
LinkDB
All DBs
Position
1:3047207..3049366
Genome browser
AA seq
719 aa
AA seq
DB search
MRTKLTAKHPRPASAERTPVRPGSANARKPVVRKAPGKPEGKPGGAAGGKGTFDRARGTG
AAPGARSGAAAGAASGGARRAPAPGARDAGDRTAGRGRGDSEGAPRRPFADRAPRSGDAP
DRQATRRPRGDSEDAPRRPFADRAPRSGDAPDRQATRRPRGDSEGAPRRPFADRAPRSGD
MPDRQATRRPRGDSEGAPRRTFAERAPRSAASAPDGARPRTRGDAEGAPRRPLAERTARG
SSSSTAAPRRSEGALGSGKRETRGTRDRDDDRPRRSSGDAPQRRPYGDAPERRSYGDARG
ANEGRRPARRSDAPYRTSDDRTAASRGTDAPYRSSSARAAPPRERASRDAERPSSPRGRA
DPRTDPRATGSTSRGSGERTFARPVKGSYAERPERSERDKRPRRATAETGAPRGAKADAP
RRGKAETQRAGKAGAPGKSTRKASPSSARAPAADIAERAPHREHADAPGTLRLSKLMSEL
GLCSRREADEWIEKGWVTVDGERIDTLGTRVRPDVNIEIDPAAEAAQARQVTILLHKPVG
YVSGQAEDGYQPAITLVTPANRWEGDRTDIRFSVAHLRQLAPAGRLDIDSTGLLVLTQDG
RVAKQLIGGHSEVDKEYLVRVTYGDIETDVEQHFPPESLAQLRHGLELDGVPLKTAQVSW
QNGEQLRFVLREGKKRQIRRMCELVGLQVVGLKRVRMGKVALGALPPGQWRYMSVDEMF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccaagttaacagcgaagcatccgcggccggcttcggccgagcgtacgccggtg
cggccgggcagcgcaaacgcacgcaagccggtggtgcgtaaggcgccgggtaagcccgaa
gggaagcctggcggcgcggccggcggcaaaggtacgttcgatcgtgcgcgcggcacaggg
gcggcgccgggtgcgcgctcgggtgctgctgcaggtgcggcctcgggtggtgcgcgacgc
gcaccggcgcccggtgctcgcgatgccggcgatagaaccgccgggcgcggtcgcggcgac
tcggaaggtgcgccgcggcggccgttcgcggaccgtgcgccgcgttcgggcgacgcaccg
gatcgtcaagctacgcgtcgccctcgcggcgactcggaggacgcgccgcggcggccgttc
gcggaccgtgcgccgcgttcgggcgacgcaccggatcgtcaagctacgcgtcgccctcgc
ggcgactcggagggtgcgccgcggcggccgttcgcggaccgtgcgccgcgttcgggcgac
atgccggatcgtcaagctacgcgtcgccctcgtggcgactcggagggtgcgccgcgacgc
accttcgcagagcgcgcgccccgctcggccgcttccgcaccggacggcgcgcggccacgc
actcgtggcgacgctgaaggcgcgccgcgccgtccgctcgccgaacgtacagcgcgcggt
tcatcgtcgagcacggctgcgccgcggcgcagcgagggcgccctcggctcgggcaaacgc
gagacgcgcggcacgcgcgaccgcgatgacgaccgtccgcgccgctcatccggcgacgca
ccgcaacgccggccttatggcgacgcgcccgaacgccggtcgtacggcgatgcgcgtgga
gcaaacgaaggaaggcggcccgcacgccgctcagacgcgccctatcgcacgtcggacgac
cgcacggcggcgtcgcgtggcaccgatgcgccttaccggtcgtcgtccgctcgcgcagcg
ccgccgcgcgagcgcgcttcgcgtgatgcagaacgcccgtcgtcgccgcgtggtcgcgca
gacccgcgcacagacccgcgcgcgaccggatcgacgagccgcggcagcggcgagcgcacg
ttcgcgcggcccgtcaaagggtcctatgcggagcggccggagcgcagcgaacgggacaaa
cggccacggcgcgcgacggcagaaactggcgcaccgcgtggcgctaaagccgacgcgccg
cgccgcggcaaggctgagacacagcgcgcaggcaaagccggcgctcccgggaaatccacg
cggaaggcaagcccatcaagcgcacgcgcccctgcagccgacatcgccgaacgcgcgcct
caccgcgagcacgccgatgcgcccggcacgctgcgtctgtcgaagctgatgtccgaactg
ggcttgtgctcgcgtcgcgaagccgatgaatggatcgagaaaggctgggtgaccgtcgac
ggtgagcgtatcgacacgctcgggacgcgcgtgcggcctgacgtgaacatcgagatcgac
ccggccgccgaagccgcgcaggcgcgtcaagtgacgatcctgctgcacaagccggtcggt
tatgtgtcgggccaggcggaggacggctaccagccggccatcacgctcgtcacgccggcc
aatcgctgggaaggcgatcgaaccgacatccgcttttcggtcgcgcatctgcgccagctc
gcgccggccggacgcctcgatatcgattcgacgggcctgctcgtgctgacgcaggacggc
cgcgtcgccaaacagctgatcggcggacactccgaggtcgacaaggagtacctcgtgcgc
gtcacctatggcgatatcgagaccgacgtcgaacagcactttccgcccgagagcctcgcg
cagctgcgtcacggcctcgaactcgacggcgttccgctcaagaccgcccaggtcagctgg
cagaacggcgagcaactgcgcttcgtgctgcgcgaaggcaagaagcgccagattcgccgg
atgtgcgaactggttggcctgcaggtggtggggttgaaacgagtacggatgggcaaagtc
gcgcttggcgcgctgccgccgggccagtggcgctatatgtcggtcgacgagatgttctga
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