Paraburkholderia edwinii: KZJ38_19860
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Entry
KZJ38_19860 CDS
T07588
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pew
Paraburkholderia edwinii
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pew03036
]
KZJ38_19860 (xerD)
Chromosome and associated proteins [BR:
pew03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
KZJ38_19860 (xerD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QYD68475
LinkDB
All DBs
Position
1:complement(4471293..4472237)
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AA seq
314 aa
AA seq
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MSDAVTTDATGAPVASPLFQSSSASIDAFCDALWLEHGLSRNTLDAYRRDLRLFAEWLAS
TRNASLDTAGEPDLTAYSAVRQKDKSTSANRRLSVFRRYYAWAVREHRAAADPTLRIRSA
KQPPRFPSTLTEAQVEALLGAPDIDTPLGLRDRTMLELMYASGLRVTELVTLKTVEVGLN
EGVVRVLGKGAKERLIPFGEEAHGWIERYLREARPALLGARSADALFVTARAEGMTRQQF
WNIIKRHAAAAGVHAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHTDISTTQIYTHVAR
ERLRSLHAAHHPRG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgctgttaccaccgatgccaccggcgcgcccgttgcgtcgcctctgttccag
tcgagcagcgcgtcgatcgatgcgttctgcgacgcgctgtggctcgaacatggcctctcg
cgcaacacgctcgatgcttatcggcgcgatctgcggttatttgccgaatggcttgcgtcg
acgcgcaatgcgtcgctcgacacggccggcgagcccgacctcaccgcttatagcgcggtg
cgccagaaggacaaatccacttccgcgaaccggcgtctgtcggtttttcggcgctattac
gcatgggccgtgcgcgaacatcgcgcggccgccgacccgacactgcgcatccgctcggcc
aaacagccgccgcgttttccgtcgacgctgaccgaagcgcaggtcgaggcgctgctcggc
gcgcccgatatcgatacgccgctcgggcttcgcgaccggacgatgctcgagctgatgtac
gcgagcggtttgcgtgtgaccgaactcgtcacgttgaagacggtcgaggttggactcaac
gagggcgtcgtgcgggtgctgggcaagggcgcgaaggagcgcctgattccgttcggcgaa
gaggcgcatggctggatcgagcggtatttgcgcgaggcgcggcctgcgctgctgggcgcg
cgttccgccgatgcgctgttcgttaccgcgcgcgcggaaggcatgacgcgccagcagttc
tggaacatcatcaagcgccatgcggctgcggccggcgtgcatgcaccgctgtcgccgcac
acgttgcggcacgcgttcgcgacgcatctgctgaatcacggtgcggacttgcgcgtcgtg
cagctgctgctcgggcatacggatatttcgacgacgcagatttatacgcacgtcgcgcgc
gagcggttgaggtcgctgcatgcggcgcatcatccgcgggggtga
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