Paraburkholderia edwinii: KZJ38_29985
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Entry
KZJ38_29985 CDS
T07588
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pew
Paraburkholderia edwinii
Pathway
pew02010
ABC transporters
pew03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KZJ38_29985
03070 Bacterial secretion system
KZJ38_29985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pew02000
]
KZJ38_29985
02044 Secretion system [BR:
pew02044
]
KZJ38_29985
Transporters [BR:
pew02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KZJ38_29985
Secretion system [BR:
pew02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
KZJ38_29985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
cNMP_binding
ABC_tran
SMC_N
AAA_25
AAA_22
Peptidase_C39_2
nSTAND3
Guanylate_cyc_2
AAA_29
AAA_23
NB-ARC
MobB
AAA_15
NACHT
DUF87
AAA_16
DUF3335
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QYD71274
LinkDB
All DBs
Position
2:1833735..1836794
Genome browser
AA seq
1019 aa
AA seq
DB search
MDAPPQTSPSTADFLASVEILSPFSRDEIERLAAQAQSRFYTFGETVCNAGDPADGLFVI
KSGSVRIFTDEHGKEISMGVRKQGEIFGEIAMLRAYVHESSVRASAKTELLFIPHAAIEP
VIVANQAAHAFVASYVAINSAGGFVAQLFDLRGKLNKTELEEYVRSVGVKRVSAGKEILR
QDTRDDRRLYVVRQGEVKIVRNEDGHDYTIATLRDGEIFGEKACLMRQEQMASVVASTDT
RLLVIPERTVHFILERNPKLREVLDERIRYADRELERQKRLEQRRKRPLTLDLHTKPEFG
ERVIKRFPLVEQAEEMDCGAACLAMICKHYGIPMTLGKLRELANVTTQGATLDSLARAGE
ALGFTTHGVQCTFDSLRGFELPFIIHWEGYHYVVVYGVSHDTVWLADPALGFRKLAVEDF
ERGWSGTCLLFTPGANLIQLAASRSPWLRFIGYLTPYRKILAYLFLATFVIQVLGVIPPL
IIQNILDGVIVHQNIGLLHLLIIGLIISNVFSQLMSTIRAYLSNFMVRNMDFAMMSQFFK
HTLSLPFSFFAKRKTGDIFARFQENQTIRAFLTESTVTTALNLLMVFIYFAIMFFYNVKM
TLTLIAFVIPIIALTVIATPKIKAYAREVFAASTDSKAFLMEALSGVETVKGMGIERPVR
LRWEKKYAKALEVQYRAHAFNIMVGFGSQLLNAATTIAILWVGANLVLAREMTIGQLIAF
NAFMGSVLSPLMGLVGLWSMLNDAGVAMERLGDVLDIEPEQKPQDLQSRVMLPDLQGEIS
LNGVYFRYGESDAPYVLENISFDIKPGELVAIVGRSGSGKTTLAKLLVGFYAPSEGKMTV
DGYDLNVVDKGYYRAQIGYVMQTNLLFSGTIAENIASGDDTPDRRRIEEVAKMADAHGFI
ARMPLGYEQVVGERGIGLSGGQIQRLCIARALYHDPRLLVFDEATSALDTQSESNILSNM
HDILKGRTAVIIAHRLSTIMRADKILVLYEGAIVEQGRHEELVNRKGMYYQLVQKQLSA
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcctccgcaaacgtcgccatccacagccgattttctcgcgtcggttgaaatc
ctgtcgccgttttcgcgcgacgagatcgagcgcctcgccgcgcaggcgcaatcgcgcttc
tatacgttcggcgaaacagtctgcaacgccggagatccggccgatgggctgttcgtgatc
aaatcgggctccgtgcgcatttttactgacgagcacggcaaggaaatcagcatgggggtg
cgcaagcagggcgagatcttcggcgagatcgccatgctgcgtgcttacgtgcatgaatcg
tcggtgcgcgcgtccgccaaaacggaattgctgtttattccgcatgcggcaatcgagccg
gtgatcgtcgccaatcaggccgcgcatgcgtttgtggcgagctatgtggcgatcaattcc
gcgggcggctttgtcgcgcaactgttcgatctgcgcggcaagctcaacaagaccgaactc
gaagaatatgtgcgcagcgtgggcgttaagcgggtaagcgccggcaaggaaattctcagg
caggacacgcgcgacgatcggcgcctttacgtggtgcggcagggggaagtcaagatcgtg
cgcaacgaggacggtcacgactacacgatcgcgacgttgcgcgatggcgagatattcggc
gaaaaggcctgcttgatgcgccaggagcaaatggcgtctgtcgtcgcgagcactgatacg
cggctgcttgtgattcccgagcgcaccgtgcatttcatcctcgagcgcaatccgaagctg
cgcgaggtgctcgacgaacgcatccgttatgcggaccgcgagctcgagcgccagaaacgg
ctcgagcagcggcgcaagcgtccgctgacgctcgatctgcatacgaagccggaattcggc
gagcgcgtgatcaagcggtttccgctcgttgagcaggcggaggaaatggactgtggcgcc
gcgtgtcttgcgatgatctgcaagcactacggcattccaatgacgcttggcaagctgcgc
gaactcgccaatgtgacgacgcagggcgcgaccctggacagcctcgcgcgcgcgggcgaa
gcgctcggctttaccacgcatggcgtgcagtgcacgttcgattcgctgcgcggcttcgag
ctgccgttcatcattcactgggagggctaccactatgtggtggtgtacggcgtatcgcat
gacacggtgtggcttgcggacccggcgctcggcttcaggaaactcgctgttgaagatttc
gagcgcggctggagcggcacatgtctgttgtttacgcctggtgcgaatctgatccaactc
gccgcgtcgcgttcgccgtggctgcgttttatcggttacctgacgccgtatcgcaagatt
cttgcgtacctgtttctggcgactttcgtgattcaggtgcttggggtgattccgccgctg
atcatccagaacattctcgatggcgtgatcgttcaccagaacatcgggctgctgcatctg
ctgattatcgggctcatcatctcgaatgtgttttcgcagctgatgtcgacgatacgcgcg
tacctgtcgaactttatggtgcgcaacatggacttcgcgatgatgtcgcagttcttcaag
cacacgttgtcgttgccgttttcgttctttgcgaagcgcaagaccggcgatattttcgcg
cgcttccaggagaaccagacgatacgcgccttcctcacggaatcgaccgtgaccaccgcg
ctgaacctgctgatggtgttcatctacttcgcgatcatgtttttctacaacgtgaagatg
acactgacgctgatcgcgttcgtcattccgattatcgcgttgacggtgattgcgacaccg
aaaatcaaggcctatgcgcgcgaggtgttcgccgcgtcgaccgattcgaaagcgttcctg
atggaggcgctgtccggcgtcgaaacggtgaagggcatgggcatcgaacgtcctgtgcgg
ctgcgctgggaaaaaaagtatgcgaaggcgcttgaagtgcagtaccgcgcacatgcgttc
aacatcatggtcggcttcggcagccagttgctcaatgccgcgacgaccatcgcgattctg
tgggtcggcgcgaacctcgtgctcgcgcgcgaaatgacgatcgggcaactgattgcattc
aacgcgtttatgggcagcgtgctgagtccgctgatggggctcgttggcttgtggagcatg
ctcaacgacgcgggcgtggcaatggagcgcctgggcgatgtgctcgatatcgagccggag
cagaaaccgcaggaccttcaatcgcgcgtgatgctgcccgatctgcaaggcgaaatcagc
ctcaatggcgtctatttccgctatggcgagagcgacgcgccgtatgtactcgaaaacatc
agcttcgatatcaagcctggcgaactcgtggcgatcgtggggcgcagcggttcgggcaag
acgacgctcgcgaagctgctggtcggcttctatgctccgagcgaaggcaagatgaccgtc
gacggttacgacctcaatgtggtcgacaaaggctattaccgcgcgcagatcggctatgtg
atgcagaccaatctgctgttttcggggacgatcgccgaaaacatcgcgagcggcgacgat
acgcccgaccggcgccgcatcgaggaagtcgcgaagatggccgacgcgcatgggtttatc
gccaggatgccgctcggttacgaacaggtggtcggcgagcgcggcatcgggctatcgggt
gggcagatccagcggctttgcatcgcgcgagcgctgtatcacgacccacggctgctcgtg
ttcgacgaagcgacctcggcgctcgatacgcaatcggagagcaatattctcagcaatatg
catgacattctgaagggccgcaccgcggtgatcatcgcgcaccggttgagcacgatcatg
cgggcggacaagatcctcgtgctgtatgaaggcgcgatcgtcgagcaggggcggcacgag
gagctcgtcaaccggaagggcatgtactaccagctcgtccagaaacagttgagcgcgtga
DBGET
integrated database retrieval system
