Paraburkholderia edwinii: KZJ38_31125
Help
Entry
KZJ38_31125 CDS
T07588
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pew
Paraburkholderia edwinii
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pew03000
]
KZJ38_31125 (prpR)
Transcription factors [BR:
pew03000
]
Prokaryotic type
Helix-turn-helix
Other families
KZJ38_31125 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS_4
AAA_5
Mg_chelatase
PAS
AAA_16
PAS_8
AAA_2
PAS_7
AAA
TIP49
AAA_7
AAA_3
Fer4_13
HTH_7
RTX
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QYD71470
LinkDB
All DBs
Position
2:2102251..2104269
Genome browser
AA seq
672 aa
AA seq
DB search
MTRLSDPISRPRIWAVGISKLRDLFRDIADEYDGRADLQLVSLGYEDAVREIEAATASQR
PDVVVAAGSNGTYLKSRVDVPVVLVNPTGFDVMHALARARRDAASVALVTYGETPPEARR
FAAAYGLDLRFASYRSAEDAEACVLDLRDRGVDAVVGPGLVTDLAARAGMEAVFLYSRAS
VRAAFDSALDVAHATWTEITRRQRLDNVLQHLRDGVAALDAQGRVEAINQRLAAALGIDA
AAAVGRPLAELAPGLAGLVSGLVSGHAQSAPEAEGETLEAVRGVSYVVHRGPLVERGATT
GMVLTFQESRAVERLDRTLRSRQRAKQFVARYRLDDLIGECEAIDRVRKLVRRYAKSDAT
VLIRGESGTGKEMIAQSLHQLSTRRDFPFVAINCGAFPEALLESELFGYEEGAFTGARRG
GKAGLIEAAHRGTLFLDEIGEMPLPLQSRLLRVLQEREVVRLGSTEPTRIDVRVVAATHR
ALTDAVEAGEFRADLFYRLNILNVALPPLRERQTDIAPLAAELLYQAARREPRLGAHIGS
AAQAARVLTAVHEPLAKHAWPGNVRELQNVIERIAVELVESDESAGNDRRSSSDERGRAL
SLTIGDLRAIAPEVFDDPARASRALTLRQRSRRVEADEIRAALDACGGDRDRVCELLGIS
KTTLWRKLNAAD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcctgtccgacccgatttcccgtccgcgcatttgggccgtcggcatcagcaag
ctgcgcgacctgttccgagacatcgccgacgaatacgacggccgcgccgatctgcaactc
gtctcgctcggctacgaagatgcagtgcgcgaaatcgaagcggccaccgcctcgcagcgg
cccgacgtggtcgtcgccgccggttcgaacggaacctatctgaagtcgcgcgtcgacgtg
cccgtggtgctcgtcaatccgaccggcttcgatgtgatgcacgcgctcgcgcgcgcccgg
cgcgatgcggcgtcggttgcgcttgtcacgtacggcgagacgccgcctgaggcgcggcgc
tttgcggcggcgtatgggctcgatctgcgattcgcgtcataccggtccgcggaggatgcg
gaagcgtgcgtgctcgatctgcgcgatcgcggtgtggacgcggtagtcggccccggcctc
gtcaccgatctcgcggcgcgtgccggaatggaagcggtgtttctgtactcgcgcgcatcg
gtgcgcgccgcgttcgattcggcgctcgacgtcgcgcacgcaacgtggaccgaaatcacg
cggcgccagcgtctcgacaacgtgctgcagcatctgcgcgacggcgtcgcggcgctcgat
gcgcaagggcgcgtggaagcgatcaaccagcgtctcgcggcggcgctcggcatcgacgcg
gccgcggcagtcggccggccgctcgccgaactcgcgccgggcctggcgggcttggtgtcg
ggcctggtatcgggtcatgcgcagagtgcgcccgaagccgaaggcgaaacgctcgaagcc
gtgcgcggcgtcagctacgtcgtgcatcgcggaccgcttgtcgagcgcggcgcgaccacc
ggcatggtgctgacgtttcaggaatcgcgcgcggtcgaacggcttgatcgcaccttgcgc
tcgcggcagcgcgcgaagcagttcgtcgcgcgttaccgtctcgacgatctgatcggcgag
tgcgaagccatcgatcgcgtgcgcaagctcgtgcgccgctacgcgaagtcggacgcgacc
gtgctgattcgcggcgaaagcggcacgggcaaggagatgattgcgcagagcctgcatcaa
ttgagtacgcggcgcgactttccgttcgtggcaatcaactgcggtgcgtttccggaagcg
ctgctcgaaagcgaactgttcggttacgaagagggggcatttacgggtgcgcgccgcggc
ggcaaggcggggctgatcgaagccgcgcatcgcggcacgctctttctcgacgagatcggc
gagatgccgttgccgctgcaaagccggctgttgcgtgtcttgcaggagcgcgaggtggtg
cgtctcggttcgacggagccgacgcgcatcgatgtacgcgtcgtggccgcgacgcatcgc
gcgctgaccgacgccgttgaggcgggcgagtttcgcgccgatcttttctatcggctcaat
atcctgaacgtcgcgttgccgccgctgcgcgaacggcagacggacatcgcgccgcttgcc
gccgagttgctgtatcaggcggcgcggcgcgaaccgcgtcttggcgcgcatatcggcagc
gccgcgcaggcggcgcgcgtattgacggctgtgcatgagccgctagcgaagcacgcgtgg
ccgggcaatgtgcgcgagttgcagaacgtgatcgagcggattgcggtcgagctggttgag
agcgatgaaagcgcgggaaacgatcggcgcagtagcagcgacgaacgaggccgcgcactg
tcgctgaccatcggcgatctgcgcgcaattgcgcccgaagtcttcgacgatccggcgcga
gcatctcgcgcgctaacgctgcgtcagcgcagccgtcgcgtcgaagcggacgagattcgc
gcggcgctcgacgcgtgcggcggcgatcgcgaccgcgtatgcgaactgctcggcatcagc
aagaccacgttatggcgcaaactgaacgcggcggattag
DBGET
integrated database retrieval system
