Paraburkholderia edwinii: KZJ38_32130
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Entry
KZJ38_32130 CDS
T07588
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pew
Paraburkholderia edwinii
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pew03032
]
KZJ38_32130
03400 DNA repair and recombination proteins [BR:
pew03400
]
KZJ38_32130
Enzymes [BR:
pew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KZJ38_32130
DNA replication proteins [BR:
pew03032
]
Prokaryotic type
DNA Topoisomerases
KZJ38_32130
DNA repair and recombination proteins [BR:
pew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KZJ38_32130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QYD73900
LinkDB
All DBs
Position
2:2345998..2347080
Genome browser
AA seq
360 aa
AA seq
DB search
MTHDTAQAIAAAMPPEMPAGLRHVDDTRPGYTRKKIARGFAYFDTDGKRIEDEAVIARIN
ALVIPPAYTNVWICPDSRGHIQATGRDARGRKQYRYHPRWRETRDADKFSRMAAFGRALP
RIRARVQRDLARSGIPREKVIAAVVHLLDHTLVRIGSVEYARENQSYGLTTLRKKHVKIQ
AGEVRFRFAGKGGVEHDVPIGNPRVKRIVRKCAELPGHDLFQYIDEDGTRRTVGSADIND
YLRDVSGADFTAKDYRTWAGSVFAMAALRQLVCDNATDAKRHIVATVKEVATLLRNTPAV
CRRCYIHPDVIAAFDAGELTDLPPQTARRHMKVDEIAFATLLAQIEKRAKKAGRTARVPA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgacacggcgcaggccattgccgcggccatgccgcccgagatgcctgcaggc
ctgcgacatgtggacgacacacggccgggctacacgcgcaagaagatcgcgcgcggcttc
gcctatttcgacaccgacggcaagcgcatcgaagacgaagcggtcatcgcgcgcattaac
gcgctcgtgattccgcccgcctacacaaacgtatggatttgccccgactcgcgcgggcac
atccaggccacgggccgcgacgcgcgcggacgcaagcagtaccgctaccatccgcgatgg
cgcgagacgcgcgacgccgacaagttcagccgtatggccgccttcggacgcgcgctgccg
cgcatccgggcgcgtgtgcagcgcgatctcgcgcgcagcggcattccgcgcgagaaggtg
atcgcggcggtcgtgcatctgctcgatcacacgctggttcgcatcggcagcgtcgaatac
gcgcgggaaaatcagtcgtacggactgacgaccctgcgcaagaagcacgtcaaaattcag
gctggcgaagtgcgcttccgcttcgcgggcaaaggcggcgtcgaacacgacgtgccgatc
ggcaatccgcgcgtcaagcgcatcgtgcgcaagtgcgcggaattgccgggccacgacctc
tttcaatatatcgatgaagacggcacgcgccgcacggtcggctcggccgatatcaacgac
tatctgcgcgacgtcagcggcgcggacttcaccgcgaaggattaccgcacgtgggcgggc
agcgtcttcgcgatggccgcgttgcgccagctggtctgcgacaacgcgacggatgcgaag
cgccatatcgtggcgacggtgaaggaagtcgcgacgctgctgcgcaatacgccagccgtc
tgcaggcgctgctatatccatcccgacgtgattgccgcgttcgatgcgggcgagctgacg
gatcttccgccgcaaacggcgaggcgccatatgaaagtcgacgagatcgcttttgcaacg
ctgctcgcgcaaatcgaaaagcgcgcgaaaaaggctggccgcacagcacgcgtacccgcc
tga
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