Paraburkholderia edwinii: KZJ38_33190
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Entry
KZJ38_33190 CDS
T07588
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pew
Paraburkholderia edwinii
Pathway
pew02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KZJ38_33190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pew03021
]
KZJ38_33190
Transcription machinery [BR:
pew03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KZJ38_33190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
PhyR_sigma-like
Sigma70_r4
Sigma70_ECF
HTH_23
Xre-like-HTH
HVO_A0261_N
HTH_Tnp_ISL3
HTH_3
HTH_28
MerR
MerR_1
HTH_38
HTH_31
HTH_11
HTH_29
TnsD
HTH_17
HTH_40
Trp_repressor
GerE
Motif
Other DBs
NCBI-ProteinID:
QYD71827
UniProt:
A0ABX8UU53
LinkDB
All DBs
Position
2:complement(2628621..2629136)
Genome browser
AA seq
171 aa
AA seq
DB search
MSVVQLDAQPELGALYRDHHGWLQTWLRRKLGNAFDAADLTHDTFMRVLVAWDRRGDLDL
REPRAYLTTVAGRVLLNHYRRLSLERAFLETLELLPEAQIPSTEDRVIILETLHEIDAML
DRLDPKVRTAFLLAQLEGLSYAEVAAQLGVHVRTIKRYMATAFEECILLMM
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggttcaactcgacgcgcaaccggagctgggcgccctctaccgtgaccaccac
ggctggctgcaaacgtggttgcgtagaaagctcggcaatgcgttcgatgccgcggacctc
acgcacgacacctttatgcgggtgctggtcgcgtgggaccgacgcggcgacctcgacctg
cgcgagccgcgcgcgtatctgacgacggtcgcgggccgcgtattgctgaaccactatcgc
cggctatcgctcgaaagagcgtttctcgagacgctcgaactgctgcccgaagcgcagatt
ccgtcgaccgaagaccgcgtcatcatcctcgagacgctgcatgaaatcgacgcgatgctc
gatcgcctcgaccccaaagtgcgcacggcgtttctgctcgctcaactcgaagggctgtcc
tacgccgaggtcgccgcgcaactcggcgttcacgtgcggaccatcaagcgctatatggcg
accgcgttcgaagaatgcatcctgctgatgatgtaa
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