Paraburkholderia edwinii: KZJ38_33445
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Entry
KZJ38_33445 CDS
T07588
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pew
Paraburkholderia edwinii
Pathway
pew00100
Steroid biosynthesis
pew00909
Sesquiterpenoid and triterpenoid biosynthesis
pew01100
Metabolic pathways
pew01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
KZJ38_33445
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
KZJ38_33445
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pew01006
]
KZJ38_33445
Enzymes [BR:
pew01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
KZJ38_33445
Prenyltransferases [BR:
pew01006
]
Terpene biosynthesis
Squalene/phytoene synthase
KZJ38_33445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
QYD71872
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All DBs
Position
2:2692406..2693458
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AA seq
350 aa
AA seq
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MPNPTRAFLLGPLLKGVSRSFYLTLNVLPAGMRDPIGLAYLLARAADTIADTSIVPPAER
LSLLLSLRAAVNGASDEGAQLQRVAAQVAAQQTQSDERVLLESLEPALAILPQLSDDDRR
AVREIVTTLTQGMEFDLRTFPDEQSGDIVALREWEELDRYTYMVAGCVGEFWTKMTYAHQ
PGTLREAPDVMIERGVRFGKALQMTNVLRDCSKDLRIGRCYLPSTLLERHHLAPRDLLEP
GASLRAQPLMHELLGKTLDNYRAAVDYTLAIPARAVRLRLACVWPILIGLETLELLVANP
AWLEPGRASKIKRGDVYRILALSIPAVMSNTLLRSWMQRLIARVDVQRRA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatccgacccgggccttcctgctcggcccgcttctgaaaggtgtttcgcgttcg
ttctatctgaccttgaacgtgctgccggccggcatgcgcgatccgatcggtctcgcctat
ctgcttgcgcgcgctgccgatacgattgcggacacctcgatcgtgccgccggccgaacgg
ctctcgctgctgctgtcgctgcgcgccgcggtgaacggcgcctcggacgaaggcgcgcaa
ttgcagcgcgtggccgcgcaggtcgccgcgcaacaaacgcaatcggacgaacgcgtgctg
ctcgaatcgctcgagcccgcgctcgcgatcctgccgcaattgagcgacgacgatcgccgc
gcggttcgcgaaatcgtcacgacgctcacgcaaggcatggaattcgatctgcgcactttc
cccgacgaacagtcgggcgatatcgtcgcgctgcgcgaatgggaagaactggaccgctat
acgtatatggtggccggctgcgtcggcgaattctggacgaagatgacgtacgcgcatcag
cccggcacactccgcgaggcgcccgatgtgatgatcgagcgcggtgtgcgcttcggcaag
gcgctgcaaatgacgaatgtgctgcgcgattgcagcaaggatctgcgcatcggccgctgc
tatctgccatcgacgctgctcgagcgccatcacctcgcgccgcgcgatctgctcgagccc
ggcgcttcgttgcgcgcgcaaccgttgatgcacgaactgctcggcaagacgctcgacaac
taccgcgcagccgtcgactacacgctcgccattcctgcgcgcgcggtccgcttgcggctc
gcctgtgtctggccgattctgatcggcctcgagacgctcgaactgctcgtggcgaacccg
gcctggctcgaaccgggccgcgcgtcgaagatcaagcgtggcgacgtgtaccggattctc
gcgctatcgatcccggcggtcatgtcgaatacgctgctgcgcagctggatgcagcggttg
attgcgcgtgtcgatgtgcaaagacgcgcttga
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