Paraburkholderia edwinii: KZJ38_35290
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Entry
KZJ38_35290 CDS
T07588
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pew
Paraburkholderia edwinii
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pew03000
]
KZJ38_35290
Transcription factors [BR:
pew03000
]
Prokaryotic type
Helix-turn-helix
Other families
KZJ38_35290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_2
Mg_chelatase
HTH_23
HTH_30
HTH_28
HTH_20
AAA_5
HVO_A0261_N
HTH_50
HTH_1
HTH_11
HTH_22
ElaD-SseL-like_C
AAA
Motif
Other DBs
NCBI-ProteinID:
QYD72207
UniProt:
A0ABX8UXY2
LinkDB
All DBs
Position
2:3132960..3134990
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AA seq
676 aa
AA seq
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MPYVSQTQHIDRVRGAIEGRLPAPAAPDAQRLVSSWQRSYEQYRLDPGSVVGPRVLTSAE
LREVQGKEEAFLRASGQCLTRLHEMIRVADYCVLLTDAHGVTIDYRLERDRRSDFKHAGL
YIGSCWSEREEGTCAVANVLTDLAPITVHKIDHFRAAFTTLTCSASPIFAPTGELIGVLD
ASAVQSPDNRDSQRLVFQLVRQSAALIEDGYFLNQTAQHWLLFGHQSRNFVEAQPEVLIA
FDECGNIAASNRKAQECIAGLSGPRHIDEIFDTSAIHLHDVARGDTIVPLRLRASGTLLY
ARIREPLKRVSRGLRALTGAAAAATAGASGSASLSSGSRDAGRHTGSDALRDVGALGRFL
RSRDARIARNAEVALRIAGKRLPILILGETGVGKEVFAHALHDSGTRRARPFVAVNCGAI
PESLIESELFGYAPGAFTGARSRGARGKIAHAHTGTLFLDEIGDMPLSLQTRLLRVLAEG
EVMPLGGDTPVRVDIDVICATHRDLQRMVADGTFREDLYYRLSGATLHMPPLREREDILD
VVHEVFDEEAQGAGHALTLDAHLAERLCAFGWPGNIRQLRNVLRYACAVCDATRVDLRHL
SPDVAAILAPGHLEAGGRALTALAPLANAGDERARIVDALTRHQWHPNAAAQALGISRAT
LYRRIAKLGIVGPHRG
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgtctctcaaacgcagcacatcgatcgtgttcgcggcgccatcgaaggtcgc
ctgcctgcgccggccgcgcccgatgcgcagcggctcgtgtcgtcgtggcagcgctcttac
gagcaataccggctcgatcccggttccgtcgtcgggcctcgcgtgcttacgtctgcggaa
ttacgcgaggtacaaggtaaggaagaagcgtttttgcgcgcatcggggcagtgcctcacg
cgcctgcacgagatgattcgcgttgccgactattgcgtgctgctgaccgatgcgcacggc
gtgacgatcgactaccggctcgagcgcgaccggcgcagcgacttcaagcatgcggggctt
tatatcggctcgtgctggtcggaacgcgaagaaggcacctgtgccgtcgccaatgtgctg
accgatctcgcgccgatcaccgtgcacaagatcgatcatttccgcgcggcattcaccaca
ctgacctgcagtgcatcgccgattttcgcgccgaccggcgagctgatcggcgtgctcgat
gcgtcggctgtgcaatcgcccgataaccgcgacagccagcggctcgtgtttcaactggtg
cggcaaagcgcggccttgatcgaagacggctacttcctcaatcagaccgcacagcattgg
ttgctgttcggccatcaaagccgcaacttcgtcgaggcgcagcccgaggtgctgatcgcg
ttcgacgaatgcggcaatatcgcggcgtcgaaccgcaaggcgcaggaatgcattgcgggc
ctcagcggtccgcgtcacatcgatgagatcttcgatacgtcggcgattcatctgcatgat
gtcgcgcgcggcgacacgatcgtgccgctgcgtttgcgcgcgagcggcacgctgctgtat
gcgcggattcgcgagccgctgaagcgggtgtcgcgcggcttgcgcgcgctgacgggtgcg
gctgcggcggcgactgcgggtgcgtccgggtccgcgtctttgtcgagcggctcgcgcgat
gcaggccgtcacaccggcagcgatgcgctgcgcgatgtcggcgcgctgggccgctttctg
cgcagccgcgacgcgcgtatcgcacgcaatgcggaggtcgcattgcgcatcgccggcaag
cggttgccgatcctcatactcggcgaaacgggtgtcggcaaggaagtattcgcgcatgca
ctgcacgattcgggcacgcggcgcgcgcggcccttcgtcgccgtcaattgcggggcaatt
ccggaatcgctgatcgagagcgaactgttcggttatgcgccgggcgccttcacgggcgcg
cgcagccgcggcgcgcgcggcaagatcgcgcatgcgcatacgggcacgctgtttctcgat
gagatcggcgatatgccgctgagtctgcagacgcgtcttctgcgcgtgctcgccgaaggc
gaagtgatgccgctgggcggcgatacgccagtgcgcgtcgatatcgatgtgatctgcgcg
acgcaccgcgatttacagcggatggtcgccgatggcacgttccgcgaagacctgtattac
cggctaagcggcgcgacattgcatatgccgccgctgcgcgagcgcgaagacatactcgac
gtcgtacatgaagtgttcgatgaagaagcgcaaggcgccggccacgcgctcacgctcgat
gcgcatctcgccgagcggctctgcgcgttcggctggcccggcaatatccggcagctgcgc
aatgtgttgcgctatgcgtgcgcagtgtgcgacgcgacgcgcgtcgatctgcgccatctg
tcaccggacgttgcggcaatacttgcgccgggccatctcgaggccggcggccgtgcgctt
acggcgcttgcgccgctcgcgaatgccggcgacgaacgggctaggatcgtcgatgcgctg
acgcggcatcagtggcacccgaacgcggcggcgcaggcgctcggcatctcgcgcgcaacg
ctgtaccgccgcattgcaaagctggggatagtcggacctcatcggggctag
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