Paraburkholderia edwinii: KZJ38_35410
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Entry
KZJ38_35410 CDS
T07588
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
pew
Paraburkholderia edwinii
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pew03000
]
KZJ38_35410
Transcription factors [BR:
pew03000
]
Prokaryotic type
Helix-turn-helix
LysR family
KZJ38_35410
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Sda
Spt5-NGN
Motif
Other DBs
NCBI-ProteinID:
QYD73957
LinkDB
All DBs
Position
2:complement(3157396..3158712)
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AA seq
438 aa
AA seq
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MGFDQRAEVNESDESDDLARLRRLFLFDAVCEAGGIGQAALQSGRTQPAVSLAISKLEAS
FGGRLFERGFGGSELTAEGAIVQRRVRRMLDQMERAVASLTGQSAPAAAHGKNDARNMCR
HLTDSQVRCHIAIANAGSAAEAAQQLRISQPAVHRAARQIEQTVGVSLYRRRVHSVSANA
AGIEFARCLSLALYEIAQAREDLAYARGQLSGKVAIGVLPMLPPRLVARAIQRLRERYPA
ARLTVDEGSHARLLRELRNGTLDIIIGALRTPRLTGAVQETELFADPFIIAVRKGHRLAG
KKTIRAQDLTGYDWVVPQRNVPRRTTIDSIFARLQLKPTIVVETSSLAMMMAMLVESDCI
TLLARSQISEAYPGSEMVALELDTPAARRAVGYTVRTDWLSTAVQEAFIELLREECEERT
IFNDAPASRSRRPRPRSA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgatcaacgcgccgaagtcaacgagagcgacgagagcgacgaccttgcgcgt
ttgcggcgtctatttctcttcgacgcggtgtgcgaggcaggcggaatcggccaggcggcg
cttcaatcgggccgcacgcagccggcggtcagtcttgccatcagcaagctcgaagcgagt
ttcggcgggcggttattcgagcgcggcttcggcggcagcgaactgacggccgaaggcgcg
atcgtgcaacggcgcgtgcggcgcatgctcgatcagatggagcgcgcggtggcgagcctc
accggccagtcggcgccggcagcggcgcatggaaaaaacgacgcaagaaacatgtgccgc
catctgaccgactcgcaggtgcgctgccatatcgcgatcgccaatgcggggtcggccgcc
gaggccgcgcagcagctgcgcatttcgcagccggccgtgcatcgcgcggcgcggcagatc
gagcagacggtcggcgtttcgttgtaccggcggcgcgtgcatagcgtgtcggcgaacgcg
gccggcatcgaattcgcgcgttgcctgagtcttgcgctgtacgagattgcgcaggcgcgc
gaagacctcgcctacgcgcgcggccagctgagcggcaaggtcgcgatcggcgtattgccg
atgctgccgccgcgcctcgtggcgcgcgcgattcaacgcttgcgcgagcgctatccggcc
gcgcgcctgaccgtcgacgaaggttcgcatgcgcggcttctgcgcgaactgcgtaacggc
acgctcgatatcatcatcggtgcgctgcgcacgcctcggctcacgggcgctgtgcaggaa
accgaactgttcgccgatccgttcatcatcgccgtgcgcaaagggcatcgcctcgcgggc
aaaaaaaccatcagggcgcaggacttgaccggttacgactgggtcgtgccgcagcgtaac
gtgccgcgccgcacgacgatcgactcgatctttgcgcggctgcaattgaagccgacgatc
gtcgtcgaaacgagttcgctggcgatgatgatggcgatgctcgtcgaaagcgactgcatc
acgctgcttgcgcgctcgcagatcagcgaggcctatccgggcagcgaaatggtcgcgctc
gaactcgacacgcccgcggcgcgccgcgcggtcggatatacggtgcgcaccgactggctt
tccacggccgtgcaggaggcgtttatcgaactgctgcgcgaggagtgcgaggagcgcacc
attttcaacgatgctcccgcatcgcgatcgcgacgaccacgcccgagatcagcgtaa
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