Pedobacter endophyticus: IZT61_00315
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Entry
IZT61_00315 CDS
T07452
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IZT61_00315 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pex01007
]
IZT61_00315 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pex03016
]
IZT61_00315 (lysS)
Enzymes [BR:
pex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
IZT61_00315 (lysS)
Amino acid related enzymes [BR:
pex01007
]
Aminoacyl-tRNA synthetase
Class II (A)
IZT61_00315 (lysS)
Transfer RNA biogenesis [BR:
pex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
IZT61_00315 (lysS)
Prokaryotic type
Other AARSs
IZT61_00315 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QPH39762
UniProt:
A0A7S9KZL8
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All DBs
Position
complement(64483..66192)
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AA seq
569 aa
AA seq
DB search
MSIGLSEQEILRRESLQQLRELGIEPYPAEAYEVNAYAADINANYEKDKTAYKTISIAGR
LMTRRIMGSASFAELQDSTGRVQLYLKRDDLCPDEDKTLYNTVFKKLLDLGDYIGVKGYV
FTTQTGEISVHVTEFKVLAKSLRPLPVVKRDDDGNIYDGFTDPELRYRMRYVDLTVNPDY
KQIFIKRSKVINTMRSYFDNQGWMEVETPILQPIHGGAAARPFATHHNTLDMPLYLRIAN
ELYLKRLIVAGFDGVYEFGKMFRNEGMDRTHNPEFTSMEIYVAYKDYVWMMAMVEECLEK
VAIATTGSALVKVGQNEINFEGPYEKLTMYQSIQKYTGIDVSAMTEDEIAQTCKDLGIEI
DATMGRGKLIDEIFGAKVEANLIQPTYITDYPLEMTPLAKKHRSAEGLVERFELFVNGKE
IANAYSELNDPIDQKERFEDQLKLAARGDDEAMVMDDDFVRALEYGMPPTSGLGIGIDRL
VMLMTNQSTIQEVLFFPQMRPEKKKIELTAEETELFSLVSAGEQYLLADVKAKLSDWSNK
KWDTTLKALTSKGILKVAKTDDGLFLSQK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtataggattatcagaacaagaaatattgcgacgtgagtcgttacaacaattacgc
gaactgggcattgagccctatcctgccgaagcatacgaggtaaatgcgtatgctgcagat
attaatgcaaactacgaaaaagataaaactgcttataaaacgattagtattgccggaaga
ttgatgacccgccgcattatgggcagcgcctcttttgccgaactgcaagattctacaggg
cgtgttcaactgtacttaaagcgtgatgatctgtgtcctgatgaagataagaccttatat
aataccgtttttaaaaaactgttagaccttggcgattacatcggcgttaaaggttatgtt
ttcactactcaaaccggcgaaatttcggtacatgttactgagtttaaggttttggcaaaa
tcgttacgtccgcttcctgttgtaaagcgtgatgatgatggaaatatttacgacggcttt
accgatccggaattgcgttaccgcatgcgttacgttgatttaacggtaaatccagattac
aaacagatcttcattaaacgcagcaaggtaattaataccatgcgcagttattttgacaat
cagggctggatggaagtggagacacctattttacaacccattcacgggggtgcggcggca
cgtccgttcgctacacatcataatacgttagatatgccgctgtatttgcgtattgctaat
gaattgtatttaaagcgtttaattgttgctggctttgacggtgtttatgagttcggtaaa
atgttccgcaatgagggcatggatcgtacgcacaaccctgagtttacctcaatggaaatt
tatgtagcctacaaggattatgtgtggatgatggccatggttgaagaatgcctggagaaa
gtggccattgcaactacaggttcggcattggttaaagttggccagaacgaaattaatttc
gaaggtccgtacgaaaagttaaccatgtaccaatctatccagaaatacaccggaattgat
gtttcggctatgacagaagatgaaattgcgcaaacgtgtaaagatttaggcatcgaaata
gatgctacaatgggtcgtggtaaattaatagacgaaattttcggtgcaaaggtcgaagca
aacctcatccaacctacttatattactgattatccgttagaaatgacgccattggccaaa
aaacaccgttcggctgaaggcttggtagagcgtttcgagctttttgtaaatggtaaagag
attgccaacgcttattcggagttgaacgacccaatcgatcaaaaagagcgtttcgaagat
cagttgaagttggcagcgagaggtgatgacgaagccatggtaatggatgatgattttgtt
cgtgcccttgaatatggcatgccgcctacttcgggcctgggcatcggtattgatagattg
gtgatgctgatgaccaaccaaagcacgattcaagaagtgttattcttcccgcagatgcgt
cctgagaagaaaaaaattgagctcacagcagaggaaacggagttgttttcgttggtttcg
gcaggagaacaatatcttttagctgatgttaaggcgaagctctctgattggagcaacaaa
aaatgggatactacacttaaagcattaaccagcaaaggtattttaaaggttgctaaaact
gatgatggattatttctatctcagaaatag
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