Pedobacter endophyticus: IZT61_00320
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Entry
IZT61_00320 CDS
T07452
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00061
Fatty acid biosynthesis
pex00071
Fatty acid degradation
pex01100
Metabolic pathways
pex01212
Fatty acid metabolism
pex02024
Quorum sensing
pex04146
Peroxisome
Module
pex_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IZT61_00320
00071 Fatty acid degradation
IZT61_00320
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IZT61_00320
09145 Cellular community - prokaryotes
02024 Quorum sensing
IZT61_00320
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pex01004
]
IZT61_00320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pex04147
]
IZT61_00320
Enzymes [BR:
pex01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IZT61_00320
Lipid biosynthesis proteins [BR:
pex01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IZT61_00320
Exosome [BR:
pex04147
]
Exosomal proteins
Exosomal proteins of breast milk
IZT61_00320
Exosomal proteins of breast cancer cells
IZT61_00320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QPH39763
UniProt:
A0A7S9KZJ8
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All DBs
Position
complement(66840..68753)
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AA seq
637 aa
AA seq
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MPLINEFSTIPTLLRNVVKNIHKPEETFLIDKQGSEWAEISYEDTLKRADAVSAFFLEKG
IKKGDRLGLMIENSPEYVYYDQGIQQIGAINVSIYPTLSEHEVSYIINDSGIKAILVGNN
FLYRKVLKVAASCRELKYIIPAFKDFEKVAVPADVNVELIAFSDILALKHQVTAAERAEI
DQCRSLVLPDDVSSLIYTSGTTGTPKGVMLTHYNFVKNVEVCLQQIPVIDQTETFLSFLP
LSHVFERTATYHVCCAQGCKIAFAQSLELLAKNMGEVRPTVMSCVPRLLERIHDKAIKSG
TAGGGAKAKIFTWALTTGNKYRVARESGENPGLILTAKKAIAEKLVFSKIKEKTGGRLKF
MISGGAALPKNVGEFFGDLGIKILEGFGLTETSPVMSVTEYHRQVYGTVGRIIPGIEVGI
QDVDTKEMINIQTHNTFDEDFECAEGEIIVRGHCVMKGYFNKPAETAEAIDKDMWFHTGD
IGRFYKGNLQITDRLKNMIVNAYGKNVYPTPVENIYLKSPKIDQLFLIGDKREFITAIII
PNKETLEETFKLKAAFFEEHDPFIRDKEITDWMEQDIKKISNELAKFERIKNFKIKRNPF
NINEGEITPTLKVKRRVVEKKYAEAINEMYEENVEAE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgccattaattaacgaattttctactattcccacactattaaggaatgttgtaaagaac
attcataagcctgaggaaacgtttttaattgataaacaaggctccgagtgggctgaaatc
tcgtacgaagacaccttaaaacgggcagatgcagtttctgctttcttcttagaaaaagga
ataaaaaaaggcgatcgtttagggttaatgatagagaattcgcccgagtatgtttactat
gatcagggcatacagcaaattggtgcaattaatgtttcaatataccctaccctttccgaa
cacgaagtttcttacataatcaacgattccggcataaaggccatattggttggaaataat
ttcctctacagaaaagtactaaaggtagccgcaagttgcagagaattaaaatatattatt
ccggcctttaaagattttgagaaagtagccgtacccgccgatgtaaatgtggagctgatt
gcattttctgatatcctggccttgaaacatcaggttacggcagccgaacgagccgaaatt
gatcaatgcagaagtttggtgttgcctgacgatgtttcgtcgctgatttatacctctgga
actaccggaacgccgaagggtgtgatgcttacccactataattttgttaaaaatgttgaa
gtgtgcctgcagcaaattccggtgattgaccaaacagaaacttttttgtcgtttttaccg
ctctcgcatgtgtttgagcgtaccgcaacctaccatgtatgctgtgcccagggttgtaaa
attgcttttgcccaaagtttagagttattggcaaaaaacatgggcgaagtgcgtccaacc
gtgatgagttgcgtgccacgattactagagcgcatacacgataaggccataaaatctgga
actgccggtggcggagcaaaagccaaaatttttacatgggctttaactaccggaaataaa
tatcgtgttgctcgggaatcgggagaaaacccgggcctgattttaaccgctaaaaaggca
attgcagagaagttggtgtttagcaaaatcaaagagaaaactggtggcagattaaagttt
atgatttcgggcggagctgcgctacccaaaaacgtcggtgaattctttggcgacctcggc
attaaaatactcgagggatttggcctcacagaaacgtcgcccgtaatgtccgtaacagaa
taccacaggcaggtttatggaacggttggccgtataattcccggcattgaagtgggtatt
caagatgtagatacaaaagaaatgatcaacattcaaacgcataacacctttgatgaggac
tttgaatgtgcggagggtgaaattattgttcgtggccactgtgtaatgaaaggctacttt
aacaagcccgccgaaactgctgaggcaattgataaagacatgtggtttcatacgggagat
attggacgcttttacaagggaaatctgcaaattaccgaccggttgaaaaatatgatcgta
aatgcgtatggtaaaaacgtttatcctacgcctgtagagaacatttatttaaaaagcccg
aaaatagatcagttgtttttgatcggcgataaacgtgaatttatcacggcgattattatc
cccaacaaagaaacactggaagaaacctttaagcttaaggccgccttttttgaagagcat
gacccctttatccgcgataaggaaattaccgactggatggagcaggacattaaaaagata
tctaatgagctagcgaagtttgagcgcattaagaactttaaaattaaacgaaatccattc
aatatcaacgaaggtgagattacgcctaccttgaaagtgaagcgtcgtgtagttgagaag
aaatacgctgaagccatcaatgagatgtatgaagaaaatgtagaggcagagtag
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