Pedobacter endophyticus: IZT61_02740
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Entry
IZT61_02740 CDS
T07452
Name
(GenBank) family 78 glycoside hydrolase catalytic domain
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00946
Degradation of flavonoids
pex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
IZT61_02740
Enzymes [BR:
pex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
IZT61_02740
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
Ig_J_second
Motif
Other DBs
NCBI-ProteinID:
QPH40215
UniProt:
A0A7S9L0G3
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All DBs
Position
complement(668554..671313)
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AA seq
919 aa
AA seq
DB search
MSKILIFSWCYFMSLSLFAQEIKVVDLTCGYRKNPIGIDLTSPNLSWKLQSARHNVMQTA
YQILVSSSLGQLNKNVGDVWDSKKVNANQSIQLQYKGTELLPTKTYYWKVRVWDNFGRQS
AWSDSNFWQMGLLSTEDWKGAKWIAYEKLADSNVNVLPVDGKKDQYQGSNILPMFRKKFG
VAKTVKKATAFISGLGHFEMSLNGEKVGDDFLAPGWTKYDKEALYVTYDVTKQLKKGENA
IGVMLGNGFYYIPPVKARYRKLKIANGYPKMICRVLVEYSDGTSTNIISDQTWKTAPSPV
TFSSIYGGEDYNANLEQKGWNSAGFNDSKWKSALLVEGPKLNAQKEEPIKTFETFSAQNI
SVTSNGEWVYDMGQNSSAIIELTVRGKKGDTVRITPAELLKTDGSVTQKNIGGPSYFTYI
LKGDGLEIWRPKFFYTGFRYLQVRGAVPSGRENTSSTTKIDDLKALHIRNAAEQVGQFAS
SSELFNKTFNLIDWSIKSNMVSVFTDCPHREKLGWLEQLHLMGNSVVYNYNAAPLFKKAL
ADMKNSQLPNGLIPEIAPEYVKFEWGGDMFRDSPEWGSSGILLPWYLYQWYGDKQAMVDY
YPMMQRYLNYLATKADNYVLSQGLGDWYDLGPKPPGVSQLTPMGVTGTAIYYYDLEIITK
IAALLGKKADALAYSKLAIEVKKSFNNKFFDLKTKQYATGSQAANAMAVYMNLVEEKDRS
AVIDNLVQDIRNRKNSLTAGDIGYRYVLRVLEDAGKSDVIFDMNSRSDVPGYGMQLAKGA
TALTESWAALPTVSNNHFMLGHLMEWLYSGVGGIRQAENGIAFNQIEIEPEVLGDLTSAD
VRYNAPYGQISTKWKKTGTNFTLEVNIPANTKAVVYFPALPNGIISEENNVAFANSGIEN
GKAKVSIGSGHYKFNLKYQ
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaatcctaatcttttcgtggtgttacttcatgagcctttcgctttttgcgcaa
gagattaaggttgtcgacttgacctgtggctaccggaaaaacccgattggtatcgatctt
acttcacccaatttgagttggaagttgcaatcggcgaggcacaatgtgatgcaaacggct
tatcaaattttagtttcgagcagtttaggtcaattgaacaagaacgttggcgatgtttgg
gacagcaaaaaagtaaatgccaatcaatctattcagctacaatataaaggaactgagctt
ttaccaaccaaaacctattactggaaagttcgggtttgggataatttcggtcgtcaatcg
gcatggagcgattccaatttttggcaaatgggcttactaagcactgaggattggaaggga
gccaaatggattgcttacgaaaagctggccgattcaaacgtaaacgtattgcctgttgat
ggcaaaaaggatcaataccaaggcagcaacatcttgcccatgtttcgcaaaaagtttggg
gttgccaaaacggtaaaaaaggctacggcttttatctctggcctcggtcattttgagatg
agcttgaacggtgaaaaagtgggcgacgatttccttgcgcccggctggaccaaatatgat
aaagaggctttatatgttacttacgatgtaaccaaacagctgaaaaaaggcgaaaatgcg
ataggggtaatgcttggaaacggattttactatattccgccagttaaagcacgatacaga
aagttaaagattgccaacggttatccaaagatgatctgtcgcgttttagtcgaatattca
gatggaacttcaacaaacatcatcagcgatcaaacttggaaaactgccccttcgccagtt
actttttcaagtatttatggcggcgaagattataatgcaaacctcgagcaaaaaggttgg
aattccgctggttttaacgattcaaaatggaagtcggccttattggttgagggcccaaaa
ttgaatgcacaaaaggaagagccaattaaaactttcgaaaccttttcggctcaaaacatc
agcgttacaagcaatggcgagtgggtttacgatatggggcagaattcatcagccattatc
gaattaacggtacgcggtaaaaagggcgacaccgttcggattacaccagccgagttacta
aaaacagatggttcggtaacacagaaaaatattggcggcccatcgtatttcacctacata
ctaaagggcgatggcttggaaatctggcgaccaaaattcttttataccggattccgttat
ctgcaagttaggggcgctgttccgagcggcagggaaaatacctcttctacgacgaaaatc
gacgatttaaaagccttgcacatcagaaatgctgccgaacaagttggtcaatttgcctct
tcgagcgagctgttcaacaaaaccttcaacttgatcgattggtcgatcaaaagcaacatg
gtaagtgtttttaccgattgtccgcaccgcgaaaagctgggttggctagagcagctgcat
ttaatgggcaactcggtagtttacaactacaacgcagcgccattgtttaaaaaagcgctg
gcggatatgaaaaattcgcaattgcccaacgggttgattccagaaattgcgcccgaatat
gtaaaatttgaatggggtggagatatgtttcgcgattcgccagagtggggaagcagcggt
atcttgttgccttggtatttgtatcaatggtatggcgataagcaggccatggtcgattat
tatccgatgatgcaacgctaccttaattatttggcaacaaaggccgataattacgtttta
tcgcaaggattgggcgattggtacgacttaggccccaaaccgccgggcgtttctcaattg
acgccaatgggtgttaccggaacagcaatttattattacgacttagaaattataaccaaa
atagcggcgcttttaggcaaaaaggcagatgccttggcctattcaaaattagccattgag
gttaaaaaatcgttcaataacaagtttttcgatctcaaaaccaagcaatatgcaacaggt
tcgcaggccgcaaatgcaatggcggtttacatgaacttggtagaagaaaaagatcgaagt
gccgtaattgataatttggttcaggatattcgcaatcggaaaaacagtttaacagcaggc
gatattggctaccgctatgtgctgcgggttttggaagatgcgggaaaatcggatgtgatc
ttcgatatgaacagtcgctcagatgtgcccggttacggcatgcaacttgccaaaggcgca
accgccttaaccgaaagttgggcagcattgccaaccgtttcaaacaatcactttatgctt
gggcacttaatggaatggttgtatagcggcgttggcggcatccgtcaggcagaaaacgga
attgcttttaatcaaattgaaattgaaccagaagtgctgggcgatttaacttctgccgat
gtgcgttataatgctccatatggccaaatatcaaccaaatggaagaaaacaggtacgaac
tttacgttggaggtaaatattcccgcaaacacaaaagccgtcgtttattttccggctttg
ccgaatggcatcatttccgaagaaaacaatgtcgcttttgcaaactcaggcatcgaaaat
gggaaagcaaaagtttcaataggttcagggcactacaaatttaatttaaagtaccaatga
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