Pedobacter endophyticus: IZT61_03285
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Entry
IZT61_03285 CDS
T07452
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pex
Pedobacter endophyticus
Pathway
pex02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IZT61_03285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pex03021
]
IZT61_03285
Transcription machinery [BR:
pex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IZT61_03285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_11
GerE
Sigma70_ECF
HTH_24
HTH_40
HTH_DeoR
HTH_5
HTH_23
tRNA-synt_1c_C
HTH_Mga
WHD_HrcA
HTH_38
Mrr_N
HTH_10
PF0610-like_N
S-AdoMet_synt_C
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QPH40316
UniProt:
A0A7S9L1B3
LinkDB
All DBs
Position
complement(816525..817112)
Genome browser
AA seq
195 aa
AA seq
DB search
MNGELESNFFLLVRSDKAKAFQLVFDAYWESLYKQAYKKIHSSDLAQDLVQDVFICLWDK
IDLLDAEKSVLAYLYAILRNKILKIYEKDEVRLRYAINVTAKEVACDNYSQNTLLEKELK
KIIDQEIELMPPRMKAIYILKKEDELSIKEIADNLSLSEQTIKNQLQSAYNRLRNRVKDY
DSSLALLTILITKYL
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaattagaaagtaattttttccttttggtaagatcggataaggcaaaagcg
tttcaactcgtatttgatgcctattgggaaagcctttacaagcaggcttataaaaaaatt
cattccagtgacctcgcacaagatttggttcaagatgtttttatctgcctttgggacaag
atagacctgctggatgctgaaaaaagtgtactcgcttatctttatgccattttaaggaac
aagattttaaaaatctacgaaaaggacgaggttaggttacgttatgctattaatgtaacc
gctaaggaagtggcttgtgataattattcgcaaaacacactgctcgaaaaggagcttaag
aaaataatcgaccaggagattgagctcatgccaccgcgaatgaaggcaatttacatcctc
aaaaaagaagatgagctttctattaaagagatcgccgacaatctgtcgctctccgaacag
accataaagaaccagcttcaaagtgcttacaatcggttaaggaatcgagtgaaagactat
gattcatcgttggctttgctcacaattttgatcaccaaatatctttag
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