Pedobacter endophyticus: IZT61_03480
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Entry
IZT61_03480 CDS
T07452
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pex02000
]
IZT61_03480
Transporters [BR:
pex02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IZT61_03480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
QPH40354
UniProt:
A0A7S9L141
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All DBs
Position
complement(870991..872703)
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AA seq
570 aa
AA seq
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MKNYKIFTAIVLLTLCSLSCKKDYLERTPGVAISEDEIFADPALAARFADNAYNYLITKY
VRFNDHRGSTSQASDEAVSGNSEGSVTSLNRGLYHDHSNGPSLNDIYGVWKLMYAGIAVQ
NKMLARIGDVPPSPNASVPIFDPKRVEGEMHFLRALSYFELTKRFGGVPIVDKVYSVNDD
INLPRSTFAEVTDFILKDLEVALTKLGTDADYGPSNYGRPTIGAAQALKARVLLYAASPL
NNPSNDKSKWQLAADAAKVLMDGRYELQPSYTDLLNLPSSPEYIMIRIKGNTPLSGEMMQ
DFSMSPGSGGAQGQMNPTQNHVDMYEMANGKPISDPTSGYNPQKPYEGREPRFYDNIIYN
DRPWQGGKIEMWSTLTADGKTVYGKDYNPTITYTATRYYCKKYWPEVYRTVGGSTTLLNY
IYFRYGEVILNYAEAQNEAVGPDQSVYDQLIAIRKRAGILPGSNNLYGLKANMTQDEMRT
AIRHERAIELAFEDHRWYDIMRWKIGAQTIAVPMKGMDVFKNANGSFTYTPIVLSSTFQK
TWTEAQNLYPIPRAEIYKSKGVLTQNPGWE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactacaaaatatttacagcaatcgtgcttttaacgctctgttcgctttcttgt
aaaaaagattacctcgagcgtacacccggcgttgcgattagtgaggatgaaatttttgct
gatcccgctttagctgcccgcttcgcagataacgcttacaattacctgattaccaaatat
gtgcgatttaacgatcaccgtgggagcacttcacaggcttcagatgaggcagtttcagga
aactccgaaggttcggtaacgtcgttaaatcggggtttatatcacgatcattctaacggc
ccatcgttaaacgatatttatggcgtatggaaactgatgtacgccggcattgccgttcaa
aataaaatgctggccagaattggcgacgtgccgccatctccgaatgcaagtgtgccaatt
ttcgacccgaaaagggtagagggcgagatgcactttttaagagccttatcgtattttgaa
ctgaccaaaaggtttggcggcgtacctattgttgataaggtgtatagcgtaaatgatgac
attaacctgccacgcagcacgtttgcagaggttacggactttattcttaaagatttagaa
gtagcgctgacaaaattaggcactgacgccgattacggcccatcaaactacggccgccca
accatcggcgcagcacaggccttaaaagcacgggttttattgtatgcagcaagcccgtta
aataatccttcgaacgataaatcgaaatggcaactcgccgcagatgctgccaaagtttta
atggatggaagatacgaattgcaaccatcgtacaccgatttattgaacctgccatcgtct
cccgagtacatcatgatcagaattaagggaaatactccgctttcgggcgaaatgatgcag
gatttttcaatgtcgcccggctctggtggtgcgcagggacaaatgaacccaacgcagaac
catgtcgatatgtacgaaatggctaatggaaagccaatcagcgatccaacttcaggttat
aatccacaaaaaccatacgaaggtcgcgagccacgtttttacgataacattatttataac
gatagaccgtggcaaggtggcaaaatcgaaatgtggtcgacgctaaccgccgatggcaaa
acggtttacggtaaagattataacccaaccattacctataccgccacacgttactattgc
aaaaaatactggccagaggtttaccgaactgttggcggcagtacaactttgctaaactac
atttatttccgctatggcgaagtaatactgaattatgcagaagcgcaaaacgaggccgtt
gggcccgatcaatcggtttacgatcagttaatcgcgatccgcaaaagggcaggcatttta
cccggaagcaataatctttacggcttgaaagccaacatgacgcaggatgaaatgagaacg
gcaataagacatgagcgtgccatagaactggctttcgaagatcaccgctggtacgatatt
atgcgctggaaaattggcgcacaaaccatcgccgtgccaatgaaaggaatggatgtgttt
aaaaatgcaaacggaagtttcacgtacacgccaattgtgttaagctcaacatttcaaaaa
acgtggactgaggcgcaaaatttatacccgattccgcgtgccgagatttataaaagcaaa
ggtgtattaacacaaaatccgggttgggaataa
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