Pedobacter endophyticus: IZT61_03890
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Entry
IZT61_03890 CDS
T07452
Name
(GenBank) AraC family transcriptional regulator
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pex03000
]
IZT61_03890
Transcription factors [BR:
pex03000
]
Prokaryotic type
Helix-turn-helix
AraC family
IZT61_03890
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DUF1207
DUF3606
Motif
Other DBs
NCBI-ProteinID:
QPH40433
UniProt:
A0A7S9PZK2
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Position
972902..973780
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AA seq
292 aa
AA seq
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MSSSERVDLTTKDQIHVCRSSVLNNQIKDIDISRRWPYFFILYALTEDAQHCIENEKFTV
PLGQFLFVGPDRFHSFINAENDDFWVIYFDYGFYARSPNDAYFIQNTPLFFDLSKNYLSS
PSIDIAEYVTLQFEFLEKLIRSSQAPLVRDIVHNAVQAMLIRSAFLSQGLHSKDVHFDNL
EDKKIAIRFRELLHLNYRNEKKLDYYANALHTTPRRLNQAITNIYGRSAKQLVTEKIFEE
AKSKLAHTDLTIKEISFDMGFTEENNFSAFFTKHAGFSPKKYRNLQHSINAE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagtgaaagggttgatcttaccaccaaagaccagatccatgtttgtcgttca
tccgttttaaataaccaaattaaagacatcgacatctcccgaagatggccgtatttcttt
attctgtacgcacttaccgaggatgcacagcactgtatcgagaatgaaaagtttaccgtt
ccgttaggccagtttctgtttgtaggacccgatcgatttcattcttttatcaatgcagaa
aacgatgatttttgggtgatttatttcgactatggtttttatgcccggagcccgaatgat
gcctattttattcaaaacaccccattattcttcgatttaagcaaaaattacctaagcagc
ccatccattgatattgctgaatatgtaacgttgcagtttgagtttttagagaagctaatc
cgcagttctcaggctcctttggtacgcgatattgtacataacgccgtgcaggccatgctg
atcagatctgcatttttatcgcagggattgcacagtaaagatgttcatttcgataacctc
gaagataaaaaaattgcgattcggtttagggaacttcttcaccttaattaccgcaacgaa
aaaaagctcgattattatgcaaatgcgctgcacacaactcctcggcgcttaaatcaagcc
attaccaacatatatggccgctcggcgaagcaactggtaacggaaaagatttttgaggaa
gcgaaaagtaaacttgcccataccgacctcaccattaaagaaataagcttcgacatgggc
ttcactgaagaaaacaatttcagtgcattttttaccaagcatgccggcttcagcccaaaa
aaatacagaaacctgcaacacagtataaacgcagaataa
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