Pedobacter endophyticus: IZT61_05005
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Entry
IZT61_05005 CDS
T07452
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00010
Glycolysis / Gluconeogenesis
pex00020
Citrate cycle (TCA cycle)
pex00260
Glycine, serine and threonine metabolism
pex00280
Valine, leucine and isoleucine degradation
pex00310
Lysine degradation
pex00380
Tryptophan metabolism
pex00620
Pyruvate metabolism
pex00630
Glyoxylate and dicarboxylate metabolism
pex00640
Propanoate metabolism
pex00670
One carbon pool by folate
pex00785
Lipoic acid metabolism
pex01100
Metabolic pathways
pex01110
Biosynthesis of secondary metabolites
pex01120
Microbial metabolism in diverse environments
pex01200
Carbon metabolism
pex01210
2-Oxocarboxylic acid metabolism
pex01240
Biosynthesis of cofactors
Module
pex_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pex_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pex_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pex_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
IZT61_05005 (lpdA)
00020 Citrate cycle (TCA cycle)
IZT61_05005 (lpdA)
00620 Pyruvate metabolism
IZT61_05005 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
IZT61_05005 (lpdA)
00640 Propanoate metabolism
IZT61_05005 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IZT61_05005 (lpdA)
00280 Valine, leucine and isoleucine degradation
IZT61_05005 (lpdA)
00310 Lysine degradation
IZT61_05005 (lpdA)
00380 Tryptophan metabolism
IZT61_05005 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IZT61_05005 (lpdA)
00670 One carbon pool by folate
IZT61_05005 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pex04147
]
IZT61_05005 (lpdA)
Enzymes [BR:
pex01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
IZT61_05005 (lpdA)
Exosome [BR:
pex04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
IZT61_05005 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
DAO
FAD_binding_2
NAD_binding_8
HI0933_like
GIDA
FAD_binding_3
Lys_Orn_oxgnase
2-Hacid_dh_C
3HCDH_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
QPH40636
UniProt:
A0A7S9L193
LinkDB
All DBs
Position
1247267..1248655
Genome browser
AA seq
462 aa
AA seq
DB search
MNYDVIVLGSGPGGYVAAIRASQLGMKVAIVERESLGGICLNWGCIPTKALLKSAQVFEY
INHAAEYGITTSGATADFAAVVKRSRGVADGMSKGVQFLMKKNKIDVIMGTGKLKPGNKL
EVKDADGSQKELTAKNIIIATGARSRELPNLKQDGKKIIGYRQAMVLPEQPKSMVVVGSG
AIGVEFAYFYATMGTKVTIVEFMENVVPVEDEDVSKQLLRSLKKVGIDVMTSASVESVDT
SGAGCKVSVKTATGMQTIDADIVLSAAGIVANIENIGLEETGIKTEKGKIVTDEFYNTSV
KGYYAIGDVVGGQALAHVASAEGIICVEKIAGQHVEPLDYNNIPGCTYCTPEIASVGYTE
KAAKAAGYELKIGKFPFSASGKASAAGAKDGFVKLIFDAKYGELLGAHMIGANVTEMIAE
IVVARKLETTGHEMIKSVHPHPTMSEAIMEAAADAYGEVIHL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgacgttattgttttaggcagcggcccaggtggctatgtagctgcaatcaga
gcttcacaattgggaatgaaagttgcaattgttgagcgtgaatcattaggtggtatttgt
ttaaactggggctgtattcctacaaaagcacttttaaaaagcgctcaggttttcgaatat
atcaaccatgcggccgagtacggaattacaacctcaggcgcaactgccgattttgcagcg
gttgtaaagcgcagtcgcggcgtagccgatggcatgagcaaaggcgttcaatttttgatg
aaaaagaataaaattgacgtaattatgggcactggtaaattaaagccaggcaataaactc
gaagtaaaggatgccgatggctctcaaaaagaactcacagcaaaaaatatcatcatcgct
acaggtgcacgctcgagagagttgccaaacctgaaacaagacggtaaaaaaattatcggc
taccgccaggcaatggtgctacccgagcagcctaaaagcatggttgtggtaggttctggt
gccataggtgtagaatttgcctatttttatgctacaatgggcacaaaggttaccattgta
gagtttatggaaaatgttgttcccgtagaggatgaggacgtatctaaacaattgttgcgc
agccttaaaaaagtgggtatcgatgtaatgacatcggcatcagtagaatcggttgacaca
agcggagcgggctgcaaggtttctgttaaaactgcaacagggatgcaaactatcgacgct
gatattgtgctttctgccgctggtattgtagccaacatcgaaaacattggcctcgaagaa
accggcattaaaactgaaaaaggcaaaatcgtaaccgacgaattttacaatacatcagta
aaaggttattatgccattggcgatgtggttggcggacaagcgcttgcacacgtagcatct
gctgaaggtattatctgcgtagaaaaaattgccggccaacatgttgagcctttagattac
aataacattccgggatgtacttattgcacgcctgaaattgcttcagtaggttacaccgaa
aaagcagccaaagcagccggttacgagttaaagatcgggaagtttccattctctgcctcg
ggtaaagccagtgctgccggtgcaaaagatggctttgttaagttaattttcgacgcaaaa
tatggcgaattattaggtgcccacatgattggcgctaatgttaccgaaatgattgccgaa
attgtagttgctcgtaaattagaaactaccggccacgaaatgatcaaatctgttcacccc
caccctaccatgagcgaagccattatggaagctgctgccgatgcgtacggagaagtgata
cacttgtag
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