KEGG   Pedobacter endophyticus: IZT61_05075
Entry
IZT61_05075       CDS       T07452                                 
Name
(GenBank) type II CRISPR RNA-guided endonuclease Cas9
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
pex  Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:pex00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pex02048]
    IZT61_05075
Prokaryotic defense system [BR:pex02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    IZT61_05075
SSDB
Motif
Pfam: RuvC_III HNH_4 Cas9-BH DUF1451
Other DBs
NCBI-ProteinID: QPH40649
UniProt: A0A7S9L1A6
LinkDB
Position
1264507..1269033
AA seq 1508 aa
MKNILGLDLGTNSIGWALIQQDFEKKQGTILGMGSRIIPMSQDILGDFGKGNSVSQTAER
TSYRGVRRLRERFLLRRERLHRVLNILSFLPQHYAAQIDFEKRLGKFIDEKEPKLAYRTE
WNEAKEKAEHHFIFKNAFEEMLADFQQHQPHVLINKDGDAALVPYDWTIYYLRKKALTKK
INKEELAWILLNFNQKRGYYQLRGEEEEENPNKLIEFHSLNVVDVIADEPQRGKADIWYS
LVLENGWVYRRSSKTPLFDWKDKIHDFIVTTDLNDDGSVKTDKEGNEKRSFRAPGESDWT
LLKKKTEREIEKSEKTVGTFIYDTLLQDHKQKIKGKLVRTIERKFYKDELGQIIQKQKEF
HTELENDDLYNDCVRELYRNNEAHLLQLSQKNFTHLFINDIIFYQRPLRSQKSSIGNCGL
EYRTYRDNEGVEHRQYLKTIPKSNPYYQEFRVWQWLYNLKIYRKDDDTDVTDKLIGTTKD
LEQLFDFLMDRREIDQKILMKYLFSSSDLKGKALTTEINQYRWNYVYDAEKDVSKSYPCN
ETRGLISSRFEKVDGASDSFLTKEIEQQLWHLIYSVTDKTEYEKALRSFASKHALDKDSF
VEAFKKFPPFKSEYGSFSEKALKKLLPLMRLGKHWDEKLIIANSTAYWNNISKILERLDK
KSKSITEKDKEDWNKTINTNLEAELSAFLDGEVQAFQGLRLHIAQYLVYGRHAEAADTKR
WNTVNDLEKFLEEFKQHSLRNPIVEQVVTETLRVVKDIWKKYGNGIRNFFTEIHVELGRE
MKNTADKRKQLTNRISENENTNLRIKAMLIEMTNDDSVFNVRPYSPMQQDILKVYEEGVL
NSAIEIDDEILKISKMAQPSSSDLKRYKLWLEQKYRSPYTGEIIPLNKLFTPEYEIEHII
PQSRYFDDSLSNKVICEAAVNKLKDNQMGLAFIKKFPGEIVPLGMGKSVKIFNENAYVDF
VKHHYAKNRGKRNKLLLEEIPEAMIERQLNDTRYISKYISGLLSSLVRAEENDEGPNSKY
VIPGNGKITGELKQDWGLNDIWNDLILPRFERFNQLTGETHFTAWNENHHKYLPTVPLAL
YKGFSKKRIDHRHHALDALVIACATREHVNLLNNKHAKSKNERHDLKRNLMQFERTVYKH
PQTGERIERDVAKAFEVPWNSFKEDARNALKKIVISFKQNLRVINKATNYYESFKDEAGN
LRVDKDGKAQKSFIEQQSTNWAIRKAMHKETVYGKVDLPRIKVPKGKILTATRKSLDSSF
NLKSIENITDTGIQKILRNYLVSKDGDSELAFSPEGVEDLNKNIQQYNDGKAHQPIYKVR
VFEVGSKFPLGEKGNKRAKYVEAAKGTNLFFAVYWDEDKQKRNYDTIPLNEVIEHQKWRA
TLSNEERKDTPMIPIDTENGKFLFSLSPNDLVYVPTEEEKDSIEQLDFSSLNTEQITRIY
KMVSSTGSECHFIQSTIASLIKSYDAKSKVGEMGSLNKLEITIDTNPIRIKETCIKLKVD
RLGNISKA
NT seq 4527 nt   +upstreamnt  +downstreamnt
atgaaaaatattttaggtctcgacctcggcaccaattccattggctgggcgcttattcag
caagatttcgaaaaaaaacaaggtacaatccttggaatgggtagtcggattattcccatg
tcgcaagatattttaggcgatttcggaaaaggaaattccgtatctcaaacagctgaacga
accagctatagaggtgtgaggcgcttgcgggaacgatttttgttgaggcgagaacgattg
caccgcgtactcaatatacttagctttctaccgcaacactatgctgcgcaaatcgacttc
gagaagcgcttaggaaaatttatagatgaaaaagaacccaagcttgcctatagaacagaa
tggaatgaagcgaaagaaaaggcggaacatcattttatttttaaaaacgcttttgaagaa
atgttagctgattttcagcaacaccagcctcatgttttaattaacaaggacggagacgca
gctttagtgccctacgactggactatttattatttacgaaagaaagcgcttactaaaaaa
ataaacaaggaagaactggcttggattctactcaactttaatcagaaacgcggttattac
cagttacgtggcgaggaagaggaagaaaatcccaacaaattaattgagttccattcgtta
aacgttgttgatgttattgctgacgaaccgcaaagaggtaaagcagatatttggtactca
ttggttttggagaatggttgggtatatcgtcggtcaagcaaaaccccattgttcgattgg
aaagataaaattcacgattttatagttacaacagatctcaacgacgatggctctgtaaaa
accgacaaagagggaaatgagaaacgaagttttcgggctccgggagagagtgattggaca
ttacttaaaaaaaagacggagcgggaaatcgagaaatccgaaaaaacagtaggtactttc
atatacgataccttacttcaagatcacaaacaaaaaattaagggcaaattggtacgtacc
attgaacgcaaattctacaaagatgaattgggtcaaatcattcagaaacaaaaggaattt
cataccgaattggaaaacgacgatttgtacaacgattgcgtacgtgagctttaccgaaac
aacgaagctcatctgctccagctgagtcagaaaaacttcacccaccttttcatcaacgac
attattttctatcagcggccgcttcgtagtcaaaagtcctctattggaaattgtgggtta
gaataccgaacttacagggataacgagggcgttgaacataggcaatatttaaagaccatc
cccaagtctaatccctattatcaggaatttcgggtttggcaatggctgtataatcttaaa
atttatcgcaaagatgacgatacggatgtaacagataaattgattggcactacgaaggac
ttggagcagctttttgattttttgatggaccgaagagagatagatcaaaaaattttgatg
aagtatttattttcctcttctgatttgaaaggaaaagcactgactacagagataaatcaa
taccgctggaactatgtatatgatgctgaaaaagatgtgtcaaaatcatatccatgcaat
gaaactcgtggtttaataagcagtcggtttgaaaaggtagacggtgcttcagacagcttt
ttaaccaaagaaattgagcaacagctttggcacctgatttattccgttaccgacaaaaca
gaatacgaaaaagcgctacgatcattcgcttcaaagcacgctttggacaaggattcattt
gtggaggccttcaaaaagtttccgccattcaaaagcgaatatggttctttttcggaaaaa
gcactcaaaaaactgcttcctttaatgaggctgggaaagcattgggacgaaaagctcatc
attgcaaatagcacagcctattggaataatattagcaagatactggaacgattagacaaa
aaatcgaaatctattaccgaaaaagataaggaagattggaataaaaccatcaatacaaat
ctagaagctgaattaagcgcttttttagatggtgaagtacaggcatttcaagggttgcgc
cttcatatcgcccaataccttgtttatggccgccacgctgaagcggctgacaccaaaagg
tggaacactgtaaacgacttggagaaatttttggaagagtttaaacaacactcgcttcgc
aatcctattgtagagcaggtcgttaccgaaacgcttcgggttgtaaaagacatttggaaa
aaatatggcaatgggattagaaatttcttcactgagattcatgttgaattaggacgagaa
atgaaaaatacggctgataagcgcaagcagttgacgaatagaatttctgaaaatgagaat
accaatttacgcattaaggccatgcttatagaaatgacgaatgatgactccgtattcaac
gttcgcccctactcccctatgcagcaggatattttaaaagtatatgaagaaggcgtactt
aactcagcgattgaaattgatgatgaaatactgaaaatcagcaaaatggcacaaccttct
tcctcggatttgaaaagatataagctttggctggagcaaaagtaccgttctccttacacc
ggtgaaattattccgctaaataaattgtttacgccagagtacgaaatagaacatattatt
cctcaaagccgttattttgacgacagcctaagcaataaagtgatttgcgaagcggcggtg
aataagttaaaggacaatcagatgggcttggcttttatcaaaaaatttccaggcgaaata
gtaccgttaggaatgggtaaatcggtaaagatttttaacgaaaacgcttatgtagatttt
gtaaaacaccattatgctaaaaataggggaaaacgcaataagcttctactcgaagaaatt
ccggaggcaatgatagagcggcaattaaatgatacacgttacatcagtaagtatatttca
ggtctgttatctagcctcgttcgtgccgaagaaaacgacgaaggtccaaattcgaagtac
gttattcccggtaatggtaaaataactggtgagttaaaacaagattggggcctaaatgac
atatggaacgacttgattttacctcgttttgagcgtttcaatcaattaacaggagaaact
cattttacagcttggaacgaaaaccatcataagtacttgcctacggttccgttagcgttg
tataaaggtttttctaaaaagagaatcgaccaccgtcaccacgccttagatgcgctggta
attgcctgtgctacaagggaacatgtgaacctccttaataataaacacgccaaatcgaaa
aacgagcgtcacgatttgaaacgaaatttaatgcagtttgaaagaacggtgtataaacat
ccgcaaactggagaaagaattgaaagagatgtagctaaagcgtttgaagtgccttggaat
agctttaaagaggatgcccgaaatgctttgaaaaaaatcgtcatcagttttaaacaaaat
ctccgtgtaattaataaggctaccaattattacgaaagttttaaggatgaggctgggaac
ttgcgtgttgacaaagacggcaaggctcaaaaaagctttatagagcagcaaagtaccaac
tgggcaattcgtaaagcaatgcataaagaaaccgtatatggaaaggttgatttgccacga
atcaaagttcccaaaggaaaaattttgacagctacacgaaagtcgttagatagttcgttt
aaccttaaatctattgaaaatatcacggatacagggattcaaaagatattgaggaactat
ctggtcagcaaggatggtgattctgaattagcgttttctcccgagggtgtagaagatttg
aataaaaatattcaacaatataatgatggtaaggcacaccagcctatttacaaagtaagg
gtatttgaggtaggaagcaagtttcctttgggagaaaaaggaaacaagagagcaaagtat
gttgaggccgccaaaggcactaatttattttttgccgtttattgggatgaagacaaacaa
aagcgaaattatgacaccattccactcaacgaggtcattgagcatcaaaaatggcgagca
acgttgtccaatgaagaacgaaaagacacgccaatgattccgatagatactgaaaatggg
aaatttctgtttagtctatctcctaacgatctagtctacgttcccaccgaagaggaaaag
gatagtatcgaacagcttgatttttcgagtttgaatactgagcagatcacacgcatttat
aaaatggtcagtagtacaggaagcgagtgccattttatccagtcaacaatcgcctcttta
attaaaagctatgatgcaaaaagcaaagttggtgaaatgggaagcttgaacaaattggag
ataaccattgatacgaatccgattcggattaaagaaacctgtatcaaactaaaagtagat
cgtttgggcaatatctcaaaggcttaa

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