Pedobacter endophyticus: IZT61_05265
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Entry
IZT61_05265 CDS
T07452
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pex
Pedobacter endophyticus
Pathway
pex03420
Nucleotide excision repair
pex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IZT61_05265
03430 Mismatch repair
IZT61_05265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pex03400
]
IZT61_05265
Enzymes [BR:
pex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IZT61_05265
DNA repair and recombination proteins [BR:
pex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IZT61_05265
MMR (mismatch excision repair)
Other MMR factors
IZT61_05265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
ResIII
AAA_12
AAA_11
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPH40683
UniProt:
A0A7S9PZM2
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All DBs
Position
1317807..1320104
Genome browser
AA seq
765 aa
AA seq
DB search
MDYLEGLNPQQRAAVENTKGPVMIVAGAGSGKTRVITYRVAHLIQTGTDPFNILVLTFTN
KASKDMRERISKVVGAEAKNIWMGTFHSVFAKILRVEAEKIGYPNNFTIYDTDDSKSVIR
AILKELQLDDKLYAPNFVYGRISSAKNNLISWGEYQANDQIQAEDIQNKRPLMGQIYEAY
AKRCFRAGAMDFDDLLFKTNILLKEHPEVLNKYQQKFRYLMVDEYQDTNFSQYTIVKKLA
AAYQNICVVGDDAQSIYAFRGANIQNILNFERDYPDLKVYKLEQNYRSTQNIVDAASSII
ANNKNQLEKNVFSENVEGDRIKVSRAFTDNEEGKLVAESILQERGLKGYQYHDFAILYRT
NAQSRAMEEGLRKLNIPYKIYGGTSFYQRKEIKDLIAYFRLTFNPKDEEAIKRVINYPKR
GIGDTSVDKIIVAADQNNVTMWDVISNAHQYVDGRLANQLNDFAMMVQSFQAEAKKLDAY
DSALFIAQHAGILKELYTDDSVEGRARYENIQELLNGIKEFAEREDIEEKGLDIFMQDVA
LLTNDDKDGDKNKDTVSLMTIHSAKGLEFKNVFIVGLEENLFPSQMSVNSRSDLEEERRL
FYVAITRAEIKLTITYATSRYRWGTLTNCEPSRFINEINPRFLELDVKPAKSNVFEGNFD
DERKTWTSQPRDFFSKPKPAGTTSTPPVRPKTTSLLAKAHVPSPGFAPSQPHEFQGGMEV
EHEKFGFGKIISLEGTLPDVKATVFFQGLGNKQLLLKFAKLMIVK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
ttggattatttagaaggattaaacccacaacaaagagcagcagtagagaacactaaaggg
ccggtaatgatagttgcgggtgcaggttcgggcaaaacgcgtgtaattacctatcgtgtg
gcgcacctgattcagacgggaactgacccatttaacattttggttttaacctttaccaac
aaggcgagtaaggatatgcgtgagcgtattagcaaggtggttggcgctgaggcgaagaac
atttggatgggcacttttcactcggtttttgcgaagatcttacgtgttgaggccgaaaaa
attggctatccgaataactttaccatttacgatacggatgatagcaaaagtgtaatccgt
gcaattttaaaagagcttcagctagatgataagctgtatgcgccaaactttgtttacggg
cggatttcttctgcgaagaacaacctgatttcgtggggcgaataccaggcaaacgaccag
attcaggcggaagacattcaaaataagcgcccgttgatgggccagatttacgaagcttat
gccaaacgctgctttagggcgggggcaatggatttcgacgatttgcttttcaaaacgaac
atcttattgaaagagcatccggaggttttaaacaaataccagcaaaaattcaggtattta
atggtggatgagtatcaggatacgaacttttcgcaatacaccattgttaaaaaacttgca
gccgcttaccaaaatatttgcgtggtaggcgatgatgcgcaaagtatttatgcgttccgt
ggggcgaatattcaaaacattctcaatttcgaacgcgattatcctgatttaaaagtatat
aaactggagcagaactaccgctctacccaaaatattgtggatgccgcaagcagcatcatc
gccaacaacaaaaatcaactggaaaagaacgttttttcggagaatgttgaaggtgataga
attaaggtttcgcgtgcgtttaccgataatgaagagggaaagttggttgccgaatcgata
cttcaggagcgtggcctgaaaggttaccagtaccacgattttgcgatcctgtaccgtaca
aatgcacaaagcagggccatggaggaaggcttgcgcaagctgaatattccctataaaatt
tatggcggaacctctttctaccaacgcaaggagattaaggatttaattgcttatttccgg
ttaactttcaacccgaaagacgaggaagcgataaaaagggtaattaattatccgaaacgt
ggaattggcgatacttcggtggataaaatcatcgttgctgccgatcaaaacaacgtgacg
atgtgggatgtgatatccaatgcacatcaatatgttgatggccgtttggcaaatcaactg
aacgattttgccatgatggtgcagagctttcaggcagaggccaaaaagctggatgcctac
gattctgcgttgtttattgcacaacacgcgggcattttaaaagaattatacaccgatgat
agtgttgaaggacgtgcgaggtacgaaaatattcaggaattattaaacggtataaaagag
tttgccgagcgtgaggatattgaggaaaaaggtcttgatatttttatgcaggatgtggcg
cttttaaccaacgatgacaaggacggcgataaaaacaaggatacggtttcgctgatgaca
attcactcggccaagggtttggagttcaaaaacgtatttattgttggtttggaagagaac
ctgttcccgtcgcagatgtcggttaactcgcgttccgatttggaagaagagcgtcgtttg
ttttacgtggccattacgcgtgcggagataaaattaacgattacctacgctacttctcgt
taccgttggggaacgttaaccaattgtgagcctagtcgtttcatcaatgagatcaatcca
agatttttagaattagacgtcaaacccgccaaaagcaatgtttttgaggggaatttcgat
gatgagcgcaaaacctggacttcgcaaccgcgtgatttttttagtaagcccaagcctgca
ggcacaacctctaccccacccgttcgcccgaaaacaacttcgttactggccaaagcgcac
gttccgtcgcccggctttgcaccatcgcagccgcacgagtttcaagggggtatggaagta
gagcacgaaaagtttggcttcggcaaaattatcagtttagaaggcactctgcccgatgta
aaagcaaccgtgttttttcaaggattgggcaataagcaactattgctaaagtttgcgaag
ctgatgattgtaaagtaa
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