Pedobacter endophyticus: IZT61_07325
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Entry
IZT61_07325 CDS
T07452
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pex03009
]
IZT61_07325 (rlmF)
Enzymes [BR:
pex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
IZT61_07325 (rlmF)
Ribosome biogenesis [BR:
pex03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IZT61_07325 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Eco57I
UPF0020
Methyltransf_12
N6_Mtase
Motif
Other DBs
NCBI-ProteinID:
QPH41062
UniProt:
A0A7S9Q0T6
LinkDB
All DBs
Position
complement(1838223..1839224)
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AA seq
333 aa
AA seq
DB search
MAEQEQNNRKEKSELHPRNKHRSRYNFKQLTAASKELKRYVFKNEHNDDSIDFADQSAVK
ALNRALLKHFYNIGQWDIPKDFLCPPIPGRADYIHYVADLLGSSNKGKNPKGPNINLLDI
GVGANCIYPIIGHQEYGWSFVGSEIDPFSVESANRIIQANKELQGGIEIRKQASKMGIFR
GIVGRKERFDAVVCNPPFHSSLKEAEQGTRLKWRNLGGTEKEVKHVLNFGGNKAELWCPG
GERAFVEQMIIQSAEIKGQVLWFTSLVSKSANLKSIYNALVKVNAFEVRTVQMSQGQKIS
RFVAWTFQDDAAQAEWAKGWKNESAKTENKAVK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttggccgagcaagaacaaaataaccgcaaagaaaaaagcgagttacacccacgcaacaaa
catcgttcgcgttacaatttcaaacaacttaccgctgcatcaaaagaattgaaacgctat
gttttcaaaaacgaacataacgacgattccattgattttgccgatcaaagtgctgtgaaa
gcgcttaacagggcgttgttgaaacacttttataatattggtcaatgggatattcctaaa
gactttctttgtccgccaatacccggcagggccgattacatccattatgttgcagatttg
ttgggctcgagcaataaaggtaaaaacccaaagggaccgaacatcaacttgctcgatatt
ggggttggcgccaactgtatttacccaattatcggtcatcaggaatacggctggagcttt
gtaggctcagagatcgatccgttttcagtcgaatcggcaaatcgcattatccaggcaaat
aaagaattgcaagggggcatagaaattcgcaagcaggcctctaaaatgggaatttttaga
ggcattgtgggcagaaaagagcgtttcgacgccgttgtttgtaatccaccattccattcc
tctttgaaggaagccgagcagggcacgcgtttaaagtggcgtaacctgggcggcaccgaa
aaagaagttaaacatgtgttaaacttcgggggcaacaaggctgagctttggtgtccgggt
ggcgaacgtgcctttgttgagcaaatgattattcaaagtgcggaaattaaagggcaggtg
ttgtggttcacctcgctggtttctaaaagtgcaaatcttaaaagtatttataatgcgctg
gttaaggtaaatgctttcgaagtgcggacagtgcaaatgagccaggggcaaaaaatcagt
cgtttcgtggcctggacgtttcaggatgatgccgcacaggcagaatgggcgaagggatgg
aaaaacgaaagtgcgaaaactgaaaataaagcagttaaatag
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