Pedobacter endophyticus: IZT61_07340
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Entry
IZT61_07340 CDS
T07452
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pex03016
]
IZT61_07340 (truA)
Enzymes [BR:
pex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IZT61_07340 (truA)
Transfer RNA biogenesis [BR:
pex03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IZT61_07340 (truA)
Prokaryotic type
IZT61_07340 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QPH41065
UniProt:
A0A7S9L229
LinkDB
All DBs
Position
complement(1843461..1844213)
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AA seq
250 aa
AA seq
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MNKKRYFIQIAYDGSLYHGWQTQPNAITVQELLDKAMSVFFRQPIETLGCGRTDTGVHAK
EFYAHFDVENPDESKVLSALGGINALLPYQIAAKRIIPVANDAHARFDATARAYKYYLHF
EKDPFKLNRSWLIKDRLDIDLMNKAAELLFNYTDFSCFSKSNTQTFTNNCKITKAIFEQG
EDGLVFTIEADRFLRNMVRAIMGTLVRIGKHEINLADFKAIIESKNRSNAGQSVPACGLY
LVKVQYEYVK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaaaaacggtacttcatacaaatcgcatacgatggcagcttataccacggctgg
caaacccaacccaacgcaattactgttcaagaattgctggataaggccatgtctgttttt
tttaggcaaccgattgaaaccctcggctgcggacgaacggatacaggtgtgcacgccaaa
gagttttatgcccattttgatgttgaaaacccggacgaaagtaaggttttaagtgcccta
ggcggaataaatgcgttgttgccgtatcaaattgcagctaagcggattattcctgttgct
aatgatgcgcatgcacggtttgatgccacggcccgggcctacaagtattacctgcacttt
gaaaaggatccttttaaactcaacagatcgtggttaattaaagatcggttggatattgat
ttgatgaacaaagcggcagagttattgtttaattataccgatttctcgtgctttagcaaa
tcgaacacccaaacatttaccaacaattgtaaaataacaaaagctatttttgagcagggc
gaagatggtttggtatttactatcgaagctgaccgttttttaagaaatatggttcgggcc
attatgggaacattggtacgaataggtaaacatgaaatcaatttagcagattttaaagca
attatcgaaagcaaaaaccgtagtaatgcaggtcaatcggtacccgcctgcggcttgtat
ctggttaaggtacaatatgagtatgtaaagtga
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integrated database retrieval system
