Pedobacter endophyticus: IZT61_07635
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Entry
IZT61_07635 CDS
T07452
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00470
D-Amino acid metabolism
pex00550
Peptidoglycan biosynthesis
pex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IZT61_07635 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IZT61_07635 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pex01011
]
IZT61_07635 (murD)
Enzymes [BR:
pex01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
IZT61_07635 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pex01011
]
Precursor biosynthesis
Amino acid ligase
IZT61_07635 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
MurD_N
AlaDh_PNT_C
MutL
DUF695
Motif
Other DBs
NCBI-ProteinID:
QPH41813
UniProt:
A0A7S9Q0X3
LinkDB
All DBs
Position
complement(1914851..1916197)
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AA seq
448 aa
AA seq
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MAGQGRVVILGAGESGVGAAKLAQLKGFDVFVSDFGTIAEKYSTELEKMSIPFESGKHTE
DLILNATEVIKSPGIPSSAPIIKNLATKGVPVISEIEFAGRYTNARMICITGSNGKSTTS
LLTYHILKKAGLNVGLAGNIGHSFAAQVATEHFDYYVLEISSFMLDDMFKFKADIAVLLN
ITPDHLDRYDYKLENYAASKMRIIQNQTANDVFIYCADDEESIKALQQTVPLAKTYPFSI
VKQVEAGAFLDDQTIHINTEPNNSLTMSISELALQGKHNIYNSMASGIVAKVLELRNETI
RESMGDFKNIEHRLEHVAKISGIDFINDSKATNVNSTWYALESMTTDVVLIMGGVDKGND
YNMLKDLVQSKVKAIVCLGKNNKRIHDAFEDDVDVIVNTFSAEEATQIAFHLAKRGDTVL
LSPACASFDLFKSYEDRGNQFKAAVKEL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcagggccgtgtagttattttgggcgctggcgaaagtggcgttggagccgct
aagcttgctcagttaaaagggttcgacgtttttgtttcagattttggaaccattgccgaa
aaatacagcactgagctcgaaaaaatgtctattcctttcgaatcgggaaaacataccgaa
gatttgatcttaaatgccaccgaggtaattaaaagtcctggcattccatcaagcgcacca
atcatcaaaaaccttgcgactaagggcgttcctgtaatctccgaaattgaatttgcagga
cgatacaccaatgccaggatgatctgcatcaccggttcaaacggtaaatcgactaccagc
ttgctaacctatcatattcttaaaaaagccggtttaaacgttggtttggcgggcaatatt
ggccacagctttgcggcgcaggtagcaacggagcattttgattattatgtactcgaaatt
tcgagcttcatgcttgatgatatgttcaaatttaaggccgatatcgctgtgttattgaac
attacgcccgatcacttagacagatacgattataaactagagaattatgcggcatcgaag
atgcgcatcattcaaaatcaaacagcaaacgatgttttcatttattgtgcagatgatgaa
gaaagtatcaaagcgctacaacaaacagtgcctttagcaaaaacctatcctttttcaatc
gtaaaacaagttgaagcaggagcgtttttagacgaccaaactatacacatcaatacagaa
ccaaataatagcctaaccatgtcaatttcagaattagccttacaaggcaagcacaacatt
tataactctatggcttcgggaattgtagctaaggttttggagttaagaaatgaaaccatc
cgcgaaagcatgggcgatttcaaaaatattgagcacaggttagagcatgtggccaaaatc
tccggtatagattttatcaatgatagcaaggctaccaacgtaaactctacctggtatgcg
ctagaaagcatgacaaccgacgtggtgttgattatgggcggtgttgataagggtaacgat
tacaacatgcttaaagacttggtgcaaagcaaggtaaaagccattgtttgcctcggaaaa
aacaataagcgcattcacgatgcctttgaagacgatgtagacgtgatcgtgaatacgttt
tcggcagaagaagctacacaaattgcttttcatttagccaaacgtggcgataccgtatta
ttatctcccgcatgtgccagtttcgatctgttcaaaagttacgaagaccgcggtaatcag
tttaaagcggcagttaaagaattataa
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