Pedobacter endophyticus: IZT61_09690
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Entry
IZT61_09690 CDS
T07452
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00260
Glycine, serine and threonine metabolism
pex00630
Glyoxylate and dicarboxylate metabolism
pex00670
One carbon pool by folate
pex00785
Lipoic acid metabolism
pex01100
Metabolic pathways
pex01110
Biosynthesis of secondary metabolites
pex01200
Carbon metabolism
Module
pex_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IZT61_09690 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IZT61_09690 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IZT61_09690 (gcvP)
00670 One carbon pool by folate
IZT61_09690 (gcvP)
Enzymes [BR:
pex01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
IZT61_09690 (gcvP)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
FKBP26_C
8xMP
Motif
Other DBs
NCBI-ProteinID:
QPH41501
UniProt:
A0A7S9L3I5
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All DBs
Position
complement(2416231..2419107)
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AA seq
958 aa
AA seq
DB search
MSLNIHYKEDFQNRHIAPNEAETAEMLQTVGVNSIDELIEQTVPTAIRLKQPLNLPAAKS
ETEYLGTLKQTSLLNKVFKSFIGQGYYDTITPGVILRNVFENPGWYTQYTPYQAEIAQGR
LQALLNFQTMVIDLTGMEIANASLLDEGTAAAEAMFMQYSTRKNQAAKKFFVSELLFAQT
TDILKTRANPYGIELVIGNHLDFVATDEFFGAIVQYPAGNGEVFDYQAFAAELHSKNIKL
TVAADILSLTLLTPPGEWGADIVVGTTQRFGIPMGFGGPHAAFFATKEEYKRSIPGRIIG
VTIDSHGDYALRMALQTREQHIRRDKATSNICTAQALLAIMAGFYAAYHGPKGLKAIAER
THGLAVSLASTLKNLGYAQLNSAYFDTIRFDLGDSTGGIHAYCLDNEINLNYSGNTVTIS
VDETTTFEDITLIAKIFARAKGIAGDQVEMVENVETVVPATLQRTSAYLTHPIFNSHHSE
HEMLRYIKSLEAKDLSLCHSMIALGSCTMKLNATAEMIPVTWSHFGRIHPFAPADQVLGY
YSVFNELDKWLSEITGFAAMSLQPNAGAQGEYAGLMVIRAYHHDRGDFHRNVALIPASAH
GTNPASAAMADMKIVVVKSLENGNIDVEDLKAKAELHKDNLSCLMVTYPSTHGVFEESII
EICETVHANGGQVYMDGANMNAQVGLTSPANIGADVCHLNLHKTFCIPHGGGGPGMGPIG
VAKHLVPYLPGHAVVDIDKGKSISAVSSAPWGSASILIISHAYIAMMGAEGLTNATKYAI
LNANYMKARLEQHYPVLYSGAQGRCAHEMILDCRSFKAFGIEVTDIAKRLMDYGFHAPTV
SFPVAGTLMVEPTESEPKHELDRFCDALIAIKQEITEVENGSLDKADNPLKNAPHTVAVI
TANEWNHAYSRQTAAFPLPYVLERKFWPSVGRVNDSHGDRSLICACPPVESYLEEIVP
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaaatatccattacaaggaagattttcaaaatcgtcatattgcgccaaatgag
gcagaaacagccgaaatgttgcaaactgttggcgtaaattctatcgacgagctgattgaa
caaaccgttccaactgcaatcaggttaaaacaacctttaaatctccctgcggccaagtct
gaaacagaataccttggtactttaaagcaaacttcgttgctaaacaaggttttcaagagc
tttatcggtcagggttactacgataccattacgccgggcgtaattttgcgtaacgtattc
gaaaatccgggatggtacacgcagtatacgccttatcaggcagaaattgcgcagggtcgt
ttacaggcactgttaaatttccaaaccatggtaattgatttaacaggaatggaaattgca
aatgcatcgttactagatgagggtacagctgcggctgaggccatgtttatgcaatacagc
acccgtaaaaatcaagctgccaaaaaattcttcgtatcagaactactttttgcacaaaca
accgatattttaaaaacccgtgccaacccttatggcatcgaattggtaattggaaatcac
ctcgattttgtcgcgacagatgaatttttcggtgcaattgtacaatatcctgctggtaat
ggagaagtgttcgattatcaagccttcgcggcagaactacacagcaaaaatatcaagcta
actgttgctgctgatatcttaagcttaactttgctaacgcccccgggcgaatggggtgcc
gacatcgtagtaggtacaacgcaacgttttggtattccgatgggctttggtggacctcat
gcggcatttttcgcgaccaaagaagaatataaacgttcaatcccaggtcgtattattggc
gtaaccatcgatagccacggcgactatgcgctacgcatggccttgcaaacccgtgagcaa
catatccgcagagataaagcaacttctaatatttgtacagcacaagctttattggctatt
atggctggcttttacgccgcttaccacgggccgaaaggattaaaagcaattgcagaacgt
acacacggtttggcagtaagccttgcctcgactttaaaaaatctaggttacgcgcaacta
aactctgcttattttgatacgattaggttcgatttgggcgattcgacaggcggcatacat
gcgtattgcttagataatgagatcaacctaaactattcgggtaataccgtaactatttct
gttgacgaaaccactacttttgaagatattactttaattgccaaaatttttgcaagggca
aaaggtatcgcaggcgatcaggtggaaatggtcgaaaacgtagaaacggttgttccggca
acattgcaacgtacttcagcctatttaacacacccaatttttaattcgcaccattctgaa
catgaaatgttgcgttatattaaatcgttagaagcgaaagatttatcactttgccattcg
atgattgccctgggaagttgcaccatgaaattaaatgcaactgcagaaatgattcccgtt
acctggtctcactttgggcgcattcacccatttgctccggcagatcaggttttaggctat
tactctgtattcaatgagctggataaatggttgagtgagattacaggtttcgcggccatg
agtttacagccaaacgcaggtgcgcagggcgaatatgccggtttgatggttattcgtgct
tatcatcacgataggggcgattttcaccgtaatgtagctttaattcctgcctcggcgcac
ggtacaaacccggcatcggcagcaatggccgacatgaagatcgttgtggtgaaatcgttg
gaaaacggaaacatcgatgttgaagatttaaaagcgaaagcagaattacataaagataac
ttatcgtgtctgatggtaacttatccgtcaacgcatggtgtgtttgaagaaagtattatc
gaaatctgcgaaaccgttcatgctaacggcggacaggtttacatggatggggcaaacatg
aacgcccaggtaggtttaacaagccctgccaatattggtgccgatgtttgtcacttaaac
ctgcataaaacgttctgtatccctcacggtggtggtggccccggcatgggtccgatcggc
gtagctaaacaccttgttccttaccttccaggccatgctgtagtagatattgataaaggg
aagtcgatttctgccgtttcatctgctccctggggttcagcatcaatattaattatttcg
catgcttacatcgccatgatgggcgccgaagggttaaccaacgcgacgaaatatgccatt
ttaaacgcaaactacatgaaagcacgtttagaacaacattatccggtgctttattcaggt
gctcaaggtcgttgcgcacacgagatgattttagattgtcgttcattcaaagcattcgga
attgaagttaccgatattgcaaaacgtttaatggattatggttttcatgcaccaacggtt
tcgttcccggttgcgggtaccttaatggttgagcctacggaatcggaacctaaacatgaa
ttagatcgtttctgcgatgctttaattgccattaaacaagagattaccgaagtagaaaac
gggagtttagacaaagcagataacccactgaaaaatgctccacacactgttgccgtgatt
actgcgaacgagtggaaccatgcttatagccgtcaaaccgctgctttcccacttccctat
gtgttagaacgtaagttttggccgtcggttggtcgtgtaaacgatagccatggcgatcgc
tcattaatttgtgcatgtccgccggttgaaagttatttagaagaaatcgtaccgtaa
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