Pedobacter endophyticus: IZT61_11140
Help
Entry
IZT61_11140 CDS
T07452
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00300
Lysine biosynthesis
pex00470
D-Amino acid metabolism
pex01100
Metabolic pathways
pex01110
Biosynthesis of secondary metabolites
pex01120
Microbial metabolism in diverse environments
pex01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IZT61_11140
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IZT61_11140
Enzymes [BR:
pex01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
IZT61_11140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
ComFB
Big_11
Motif
Other DBs
NCBI-ProteinID:
QPH37671
UniProt:
A0A7U3SP53
LinkDB
All DBs
Position
complement(2758982..2759770)
Genome browser
AA seq
262 aa
AA seq
DB search
MNIKFFKYQGAGNDFILIDHTSGPLQDIDNKVVERLCDRRFGIGADGLMFLTRHESYDFE
MHYYNADGNLGSMCGNGGRCIVAFAKQLGIIKEKANFLAVDGPHYARISENGEWVDLQMI
NVEEISMDGTAYVLNTGSPHYVAQQDDLKNFDVFSAGKSIRYNNTYQAAGINVNFVQDMG
SHLFVRTYERGVEDETYACGTGVTAVAMAMAKHKQQTGHIKTEIKVLGGDIKIEFDYDGK
RFTNVFLCGPAKLVFEGQVESL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaaattctttaaataccagggtgccggaaacgattttattctgatcgatcat
acctcaggtccgctgcaggatattgacaataaagtcgttgaacgcctttgtgatcggcgt
tttggcatcggtgcagacggattgatgttccttacccgacacgaaagctacgacttcgag
atgcattattacaatgccgatggcaacctgggcagcatgtgcggaaacggcggtcgttgc
atagtcgcttttgctaaacaactcggcattatcaaagaaaaagcgaactttttggcagtg
gacggaccgcattatgccagaatttcagaaaatggcgaatgggttgatctgcaaatgata
aatgttgaggaaatttcgatggatggaacagcctacgtgctgaacacgggctctccacat
tacgttgctcagcaagacgatttgaaaaacttcgacgttttcagtgccggcaaaagcatc
cgctataacaacacctaccaagcagcaggcataaacgtaaactttgtacaggatatgggc
agccatttgtttgttcgcacgtatgagcgtggcgttgaagatgaaacctatgcatgcgga
acaggggtaaccgccgtggcaatggcaatggcgaagcataaacaacaaacaggacacatc
aaaacggaaatcaaagtgttgggcggcgatattaaaattgagttcgattacgatggtaag
cgctttaccaatgtgtttttatgcggccccgccaagttggtcttcgaggggcaggttgaa
agcctttag
DBGET
integrated database retrieval system