KEGG   Pedobacter endophyticus: IZT61_11380
Entry
IZT61_11380       CDS       T07452                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pex  Pedobacter endophyticus
Pathway
pex03030  DNA replication
pex03410  Base excision repair
pex03420  Nucleotide excision repair
pex03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IZT61_11380 (polA)
   03410 Base excision repair
    IZT61_11380 (polA)
   03420 Nucleotide excision repair
    IZT61_11380 (polA)
   03440 Homologous recombination
    IZT61_11380 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pex03032]
    IZT61_11380 (polA)
   03400 DNA repair and recombination proteins [BR:pex03400]
    IZT61_11380 (polA)
Enzymes [BR:pex01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IZT61_11380 (polA)
DNA replication proteins [BR:pex03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     IZT61_11380 (polA)
DNA repair and recombination proteins [BR:pex03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     IZT61_11380 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IZT61_11380 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2 HHH_5 DUF3913 DUF2203 HHH
Other DBs
NCBI-ProteinID: QPH37716
UniProt: A0A7U3SP64
LinkDB
Position
2803923..2806733
AA seq 936 aa
MNNKKLFLLDGMALMYRAHFALSKNPRLTSTGINTSAVMGFTNTLLDVIKKENPTHIAVV
FDTEAPTERHTTFEAYKAHRQAMPEDLAAAMPYVIKLITGFNIPVITSDGYEADDIIGTL
AKKAEARGFQVFCMTPDKDFAQLVSENIFIYKPARMGNGMEILGVKEVLAKWEIEHVHQV
IDILGLWGDAVDNIPGIPGIGEKTAKALIKQYGSMENIIANSHELKGKQRENVENFAEQG
LVSKKLATILLDVPVELDEATLELCDPSRDLLEPLFTELEFRTLGRRVFGDEFSVTTARF
QEGTQTDLFGNQSGEAIQYTDTLEEEVAEPLPAKNIENTEHDYQLVDTAEKRADLIKLLL
AEPTVSFDTETTGTDANTAELVGLSFSIKPGTGYYIPVSAVRAEAQAVVDEFRVILENEQ
IIKIGQNTKYDILVLKWYGVEVKGKLFDTMLAHYLIDPDTRHGMDVLSENYLGYTPISIT
KLIGAKGKNQGTMRDVPVEQVVDYAAEDADVTLQLANIFEPKLKELNATKLAEEIENPLV
YVLADIEKEGVRIDMDTLRAYSAELEVEIKKSEQSVYDKAGVTFNLASPKQLGEVLFDKL
QLDPKAKKTKTGQYQTGEDILTALASKSDIVQDILDFRQMQKLKSTYVDALPLMVNPKTG
RVHTSYNQAVAATGRLSSNNPNLQNIPIRTERGREVRKAFIARDENHILLSADYSQIELR
IIAEISKEENMLDAFSKGIDIHTATAAKVYGVSIEEVDSTQRRNAKAVNFGIIYGQSAFG
LSQNLGIPRKEAAEIIEQYFAQYPGIKRYMSDTMNFARENGFVETIMGRRRYLRDINSAN
QTVRGFAERNAINAPIQGSAADMIKIAMINIHKEMKAQKLQSTMTMQVHDELVFDVLKTE
KDVMKAIIEDKMANAIKLTVPIVVEIGEGDNWLAAH
NT seq 2811 nt   +upstreamnt  +downstreamnt
atgaataataaaaaactctttcttttagatggaatggcgctgatgtacagggcgcacttt
gcattgagcaaaaaccctcgtttaacttcgacaggaatcaatacatcggcagtaatggga
tttaccaatactttgttggatgtaattaagaaagaaaacccaacacatattgccgtagtt
ttcgataccgaggcaccaacagaaaggcataccacttttgaggcctataaagcgcaccgc
caggccatgcccgaagatttggccgcggcaatgccctatgtaattaaactgataacaggt
ttcaatatccccgtcatcacctccgatggttacgaagccgacgatattattggtacactt
gcaaaaaaagctgaagcaaggggctttcaggtgttttgtatgacacccgataaggatttt
gcccaactggtttctgaaaatatttttatttacaaacctgcccgtatgggtaatggcatg
gaaattttaggtgtaaaagaagtgttggcgaagtgggaaattgaacatgtacaccaggtg
attgacattttgggcctttggggcgatgctgttgataacattcctggaattccgggaatt
ggcgaaaaaacagccaaagccctgattaagcagtacggttcgatggaaaatattatcgca
aactcgcacgagcttaagggaaaacaacgcgaaaacgtagaaaatttcgccgagcagggc
ttagtctccaaaaagctggccaccatactgctcgatgtgccggttgaattagacgaagcg
actttagaactttgcgatccgagtcgcgatttgttagagcctctatttactgagctcgag
ttcagaacactgggtcgcagggtgtttggcgatgagttttcggttaccacggcccgcttt
caggaaggaacacaaaccgacctgttcggaaaccaatctggcgaggccattcaatatacc
gataccctcgaagaagaggttgctgaaccacttccagcaaaaaacatagaaaataccgaa
cacgattaccaacttgtagatactgcagaaaaacgtgccgatttaattaaattgctgttg
gccgaaccaacggtatctttcgacaccgaaacaacgggaaccgatgccaacacggctgaa
ttggtaggactgtcattttcgataaaaccgggaacgggttattatatccccgtttcggca
gttagggccgaggcacaggccgttgttgatgagtttagagtgatacttgaaaacgaacag
attataaagattggccaaaacaccaaatacgatattctggtgctgaaatggtacggtgtt
gaagtaaaaggcaaactatttgatacgatgctggcccattacctcatcgatcctgatacc
cgccacggcatggatgtattatctgaaaattatttaggctatacgcccatttccatcacc
aaacttattggcgcaaaaggcaaaaaccagggaaccatgcgtgatgttccggtagaacaa
gtggtagattatgccgccgaagatgcagatgtgaccttgcagctggccaatatttttgag
cctaagttgaaagaactcaacgccaccaaactggccgaagaaatagaaaaccctttggtg
tacgtgttggccgatattgaaaaagaaggcgtgcgcatagatatggatacgctgagggct
tattctgccgaactggaagttgagattaaaaaatcagagcaaagcgtttacgataaagcc
ggggttacgtttaatttagcttcgccgaaacagttgggtgaggttttgtttgataagctc
cagctcgacccaaaagccaaaaaaacaaaaacggggcaataccaaaccggcgaagacata
ttaaccgcattagccagcaagagcgatattgtgcaggatattctcgatttccgccagatg
cagaaactgaaatcgacttatgttgatgcattgccgctgatggtaaaccccaaaaccgga
cgtgtacatacttcgtacaatcaggcggtggctgcaaccggcagattgagctctaacaat
cccaatttgcagaatattccaattcgtaccgaacggggaagagaagtgcgtaaagccttt
attgccagagatgaaaaccacattttgttatctgccgattattcgcaaattgaattgcgc
attatcgccgagatcagcaaagaagaaaacatgctcgatgcatttagcaagggtatcgat
atccacacggcaaccgcagcaaaagtgtacggagtgagtattgaagaggttgatagcacc
caacgcagaaatgccaaagcggtaaattttgggattatttacgggcagtcggcgttcggc
ctgtcgcagaatctgggcatcccacgcaaggaagcggcagaaatcatcgaacaatatttt
gcccaatatcccggcataaaacggtacatgagcgataccatgaactttgcccgcgaaaac
ggctttgtagaaacaataatgggcagaagacgctacctaagagacattaattcggccaac
caaactgtacgtggtttcgccgaacgaaacgccataaatgcaccaattcagggttctgct
gccgacatgatcaagattgcaatgattaacattcataaagaaatgaaagcacaaaagctg
caatcgaccatgaccatgcaagtacatgatgagttggttttcgacgtgctcaaaacagaa
aaggacgttatgaaagcaattatagaagataaaatggccaatgccattaagcttaccgtc
cccattgttgtcgaaattggcgaaggcgataactggttggcagcacattaa

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