Pedobacter endophyticus: IZT61_11825
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Entry
IZT61_11825 CDS
T07452
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00521
Streptomycin biosynthesis
pex00523
Polyketide sugar unit biosynthesis
pex00541
Biosynthesis of various nucleotide sugars
pex01100
Metabolic pathways
pex01110
Biosynthesis of secondary metabolites
pex01250
Biosynthesis of nucleotide sugars
Module
pex_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IZT61_11825 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IZT61_11825 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IZT61_11825 (rfbC)
Enzymes [BR:
pex01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
IZT61_11825 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QPH37801
UniProt:
A0A7U3Q3E4
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All DBs
Position
complement(2915002..2915550)
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AA seq
182 aa
AA seq
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MEIEQTGLKDCLIIKPRVFEDPRGYFFESFNKDSFEEKTGMSGDFVQDNQSFSSYGVIRG
LHAQTGAFAQAKLVRVTKGEVLDVAVDARPGSPTYGKHISVRLSAENKLQLYIPRGFVHG
FSVLSETAEFLYKCDNFFNKASETGVIYNDVDLNIDWLIPEDKRSVSDKDLLLKPFAELQ
HD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgaacaaaccggtttaaaagattgtctgattattaagccgcgggtatttgaa
gacccaagaggttatttttttgaaagctttaacaaagacagcttcgaagaaaaaacggga
atgtctggcgatttcgttcaagataaccaatcattctcctcttatggtgtaattagaggc
ctgcacgcccaaactggcgcttttgctcaagccaagttggttcgcgtaaccaaaggcgag
gttttggatgttgcagttgatgctcggccaggatcgccaacatacggtaaacacatctcg
gttcggttaagcgccgaaaacaagctccagctatatattccacgaggatttgtacacggc
ttttcggtattaagtgaaactgccgaatttttatacaaatgcgataatttcttcaacaaa
gcctcagaaaccggcgtaatttataacgacgtagatttaaatatcgactggttgattccg
gaagataaacggtcggtatctgacaaagatttattgctaaaaccttttgctgaattacaa
catgattaa
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