Pedobacter endophyticus: IZT61_12455
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Entry
IZT61_12455 CDS
T07452
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pex01002
]
IZT61_12455
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pex01011
]
IZT61_12455
Peptidases and inhibitors [BR:
pex01002
]
Cysteine peptidases
Family C82
IZT61_12455
Peptidoglycan biosynthesis and degradation proteins [BR:
pex01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
IZT61_12455
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
GPAT_C
Motif
Other DBs
NCBI-ProteinID:
QPH37918
UniProt:
A0A7U3Q3M0
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All DBs
Position
complement(3072744..3074327)
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AA seq
527 aa
AA seq
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MPNISKFYTLILFLAFAFSDAIGQTAGDATMLPTARNNFRLDAHQLAGFILDEQIDSCKS
ALITKFYTERDYQYAWVNEQRLTRQALTFWSNYQDFLSYSADSALRNPNLFKRMVSLAKP
DYTFASADTSLQKVELAMTTLFLNFIDHAYAGKVNPKDLQWNILRKRLPLFEILNQFVAG
AELKDIVPIYPMYYSMKEKLDRLKKLEEARWSDIIDNGKLYKLGDTGAIVQAVKCRLNTL
GDLPEDDGTNFYSSEFEAAVINFQKRHGLANDGIIGPKFIKAINIPITTKIEKVRINMER
MRWMPVDDAERKVVVNIPEFRLRAYERGKEAIAMDIVVGKTANRTAIFSDQIRNVVFSPY
WNIPESIVKDEILPGIKENPSYLAQHNMEITGRRNGLPVIRQKPGSKNALGRVKFIFPNQ
YSIYLHDTPAKDLFELRKRAFSHGCIRVAEPVKLASYLLKAQPQWTAKKIVSAMNANTER
WIKIEHPVQIFISYFTAWVDQAGALNFRDDLYHRDEELAACLFDNSK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatatcagtaaattttacactttaatattgtttcttgcctttgcctttagcgat
gctattggacaaaccgctggtgatgcgacaatgttgccaacggcaaggaacaattttcgc
ctcgatgcgcatcagttagctggctttatactcgatgaacaaattgatagctgtaaatcc
gctttaataacaaaattttacacagaaagagattaccaatatgcctgggttaatgaacag
aggcttaccaggcaggcgctgacattttggagcaactatcaggattttctcagctattct
gccgatagcgccctccgcaacccaaacttatttaagagaatggtaagcttagccaagccc
gattacacctttgcatctgccgatactagcttgcagaaggtagaactggccatgaccact
ctttttttgaactttatcgatcatgcatatgcaggaaaagttaacccaaaagatttgcaa
tggaatatattgcgaaaaagacttcccctatttgaaattcttaaccagtttgttgcaggt
gccgaactaaaggatattgttcccatttacccgatgtattattcgatgaaagaaaagtta
gatcggcttaaaaaattagaagaggcacgctggtcagacattatcgataatggaaaacta
tataagttgggagataccggcgcaatagtacaggccgttaaatgccggctaaataccctt
ggcgacttgcctgaggatgatgggaccaatttctatagtagcgaatttgaggccgctgta
atcaactttcagaaaaggcatggtctggccaacgatggcattatcgggcctaaatttata
aaagcaattaatatcccgataacaacaaagattgagaaagtgcgcattaatatggagcgt
atgcggtggatgcccgtggatgatgccgagcggaaagtagtggtaaacattcccgaattt
agactgcgggcttacgaaaggggcaaagaggcaatagccatggatattgttgtagggaaa
acagctaaccggactgcaattttttccgatcagattagaaatgtcgtttttagcccctat
tggaatatacctgaaagcattgtaaaagacgaaatcctgccaggcattaaagaaaacccg
agttatttggcccaacataatatggagataaccggacggcgaaatggactgcccgttatc
cggcaaaaaccgggctcaaagaatgcattggggcgggtgaagtttatttttcctaaccaa
tacagcatttacctacacgatacaccagccaaagatctttttgagcttagaaaacgtgcg
tttagtcatggttgcatccgcgttgccgagcccgttaaactggcaagctatctcctaaaa
gcgcagccgcaatggacggctaaaaaaatcgtgagcgcaatgaatgccaacactgaacgc
tggattaagattgagcatcccgtgcagattttcatcagctattttacagcgtgggttgat
caggccggagcgttaaattttcgcgatgatctatatcatcgtgatgaagaactggcggcc
tgccttttcgataattcaaaatga
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