Pedobacter endophyticus: IZT61_14375
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Entry
IZT61_14375 CDS
T07452
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IZT61_14375 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pex01007
]
IZT61_14375 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pex03016
]
IZT61_14375 (aspS)
03029 Mitochondrial biogenesis [BR:
pex03029
]
IZT61_14375 (aspS)
Enzymes [BR:
pex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
IZT61_14375 (aspS)
Amino acid related enzymes [BR:
pex01007
]
Aminoacyl-tRNA synthetase
Class II (A)
IZT61_14375 (aspS)
Transfer RNA biogenesis [BR:
pex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
IZT61_14375 (aspS)
Prokaryotic type
Other AARSs
IZT61_14375 (aspS)
Mitochondrial biogenesis [BR:
pex03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
IZT61_14375 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QPH38273
UniProt:
A0A7U3SPA8
LinkDB
All DBs
Position
complement(3540541..3542286)
Genome browser
AA seq
581 aa
AA seq
DB search
MLRTVTCGALTLNNLGESVTLCGWVQKSRDLGGMTFIDIRDRYGITQLVFNMDDNRELCE
AARLLGREFVIKATGTVVERSNKNPKMPTGDVEIKVSALEVLNAAKLPPFMIDDETDGGD
ELRMKYRYLDLRRNPVRNNLVLRHKMAQSVRRYLDALDFIEVETPVLIKSTPEGARDFVV
PSRMNEGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSF
IEQEDILNTFEGLIRTLFKEVRNYDLPEVPRMQYADAMRLYGSDKPDTRFAMQFVEANDL
VKGKGFPVFDNAELVVGINAKGAASYTRKQLDELTDFIKRPQIGATGLIYARHNDDDTIK
SSVDKFFNEADLKQWSEAFATEKGDLLLILAGSTDKVRKQLNELRLEMGNRLGLRDKNTF
SALWVLDFPLLEWDEETERYHAMHHPFTSPKPEDIALLDTDPKNVRANAYDMVINGTEIG
GGSIRIHDRELQALMFKHLGFSAEEAQKQFGFLMDAFEFGAPPHGGIAFGFDRLTSIFAG
LDSIRDVIAFPKNNSGRDVMIDSPSTIDDKQLKELKIKTDL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttaagaacagtaacttgcggtgcactaacccttaataacttgggcgaaagtgtaacc
ttgtgtggttgggtacaaaaatcgagagatttgggcggcatgacttttatcgacatacgc
gaccgttatggtattacacaactggtttttaacatggatgataaccgtgagctttgcgaa
gcagcacgtttgttaggtcgcgagtttgtgatcaaagccactggtacggtagtagaacgc
agcaataaaaaccctaaaatgccaacaggcgatgtagagattaaagtttctgcacttgag
gttttaaatgcggcgaagctgcctccctttatgattgatgacgaaactgacggcggagac
gagctgcgcatgaaataccgttacctcgatttacgtcgcaatccggttcgtaacaacctg
gttttacgccataaaatggcgcaatccgttcgccgctacttagatgccttagattttatc
gaggtagaaactccggtgttaatcaaatctacacccgaaggcgcccgagatttcgttgtg
cctagccgcatgaacgagggtgagttttacgccttaccgcagtcgccacaaacttttaag
caattgcttatggtttcgggttttgatcggtattttcaaattgtaaaatgctttagggat
gaggatttaagagccgatcgccagccggagtttacccaaatcgattgcgaaatgtcgttt
atcgaacaagaagacattttaaacacctttgaaggcttaatccgcacactttttaaagag
gttcgcaattacgatttgccagaagttccgcggatgcagtacgccgatgcaatgcggtta
tatggttccgataagcccgacacgcgttttgccatgcagtttgtagaggcgaacgatttg
gtaaagggcaaaggcttccctgtgttcgataacgccgagttggttgttggtattaatgca
aaaggtgcagccagttatacgcggaaacagttagatgaactgaccgactttattaagcgc
ccgcaaattggtgctacaggcttaatctatgcccgacataatgatgatgacacgataaaa
tcgtcggttgataaattctttaacgaagcagatttgaagcaatggagcgaagcttttgca
actgaaaaaggcgatttgcttttaattttagctggatcgactgataaagttcgtaaacaa
ttgaacgagttgcgtcttgaaatgggtaaccgtttgggcttacgcgataaaaatactttc
tcagcactttgggtattggattttccgcttttagaatgggatgaagaaaccgagcgttac
catgccatgcaccacccctttacctcgcccaagccagaagatatcgccctgctagatacg
gacccgaaaaatgttcgtgcgaatgcttatgacatggtgattaatggaactgaaattggc
ggaggttcaattcgtattcacgatcgggaactgcaagcattaatgtttaagcatttaggt
tttagcgctgaagaagctcagaaacaatttggtttcttaatggatgcatttgagtttggc
gcacctccacacggtggaattgccttcggatttgaccgcttaacttcaatttttgcaggc
ttagattcgattcgcgatgtaattgctttccctaaaaataattcgggaagagatgttatg
atcgatagtccgagcacaatcgacgataaacaattgaaggaactgaagattaaaacggat
ctttaa
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