Pedobacter endophyticus: IZT61_14580
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Entry
IZT61_14580 CDS
T07452
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pex03400
]
IZT61_14580 (radA)
DNA repair and recombination proteins [BR:
pex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IZT61_14580 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
AAA
Lon_C
AAA_16
AAA_24
AAA_5
nSTAND3
Rad51
AAA_14
DUF7129
CobU
NACHT
NTPase_1
SLFN-g3_helicase
bpMoxR
ABC_tran
RNA_helicase
DZR
ATP-synt_ab
DEAD
ATPase_2
PAXNEB
AAA_18
NPHP3_N
HypA
Motif
Other DBs
NCBI-ProteinID:
QPH38312
UniProt:
A0A7U3Q4G9
LinkDB
All DBs
Position
complement(3591858..3593234)
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AA seq
458 aa
AA seq
DB search
MAKSKTAYFCQSCGYESAKWLGKCPSCGQWNTFVEEIVEKAPASVPTWKTDISTRKLNKP
SKVDEIQSSVERRILTGDKELDRVLGGGLVEGSLVLIGGEPGIGKSTLMLQLALNLQGKK
LLYVSGEESEQQIKMRAERIKESGVSDCYILTETSTQNIFKQIEILAPEVVVVDSIQTLH
SSHIDSTPGSVSQVRECTAELLRFAKETGVPVFLIGHITKDGAIAGPKILEHMVDTVLQF
EGDRHHVYRILRSIKNRFGAAAELGIYEMQGSGLREVSNPSEILLSQRDEELSGIAISAM
LEGARPMLIETQALVSSAAYGTPQRSATGFDTKRMNMLLAVLEKRCGFRLSTQDVFLNIA
GGIRVEDPAIDLAVLIAIISSQQDIPISSKNCFAAEVGLSGEIRAVNRIEQRIAEADKLG
FETIYISKYNLKGVDSSKYQLEIKAVGKIEEVFEMIFG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaatcaaaaactgcatatttctgtcagagttgcggctacgaatcggcaaaatgg
ttgggtaaatgtccttcgtgcggacaatggaatacatttgtagaagaaatagttgaaaaa
gcgcctgcatcagttccgacctggaaaaccgatataagtaccagaaaactaaataaaccg
agcaaggtagacgagattcaatcgtcagttgaaagaagaatattaaccggcgataaggag
cttgaccgggttttgggcggcggcttggtggagggctctctcgtgctgattggcggcgag
ccggggattggaaaatcgaccctgatgcttcaattggcgttgaacctgcaaggtaaaaaa
ctgctttatgtttcgggcgaagaaagcgagcagcaaattaaaatgcgagcggaaagaatc
aaggaaagcggcgtgtctgactgttatatcttaaccgaaacatctactcagaacattttc
aagcaaatagaaattttggcgcccgaggttgtggttgtcgactcaatccaaaccctccat
tcgtctcatatcgactctacaccgggaagcgtttcacaggtaagggaatgtaccgccgag
ctgctcaggtttgcaaaagaaacgggtgtgccggttttccttattggccacatcacgaaa
gacggcgctattgcagggccaaaaatattggaacacatggtcgataccgttttacagttt
gaaggtgatcggcatcatgtttaccgaattttgcgctccattaaaaatcgttttggcgcc
gcagccgaacttgggatctacgaaatgcagggaagcggcttacgagaagtttccaatccg
tctgaaatcttactttcgcaacgcgatgaagaactgagtggcattgcaatttcggccatg
ctggagggtgccaggccaatgttgattgaaacacaggcactggtaagctcggcagcgtac
ggcactccgcaaagatcggccacaggctttgataccaaacgcatgaatatgcttttggcc
gtgctcgaaaagcgctgcggctttaggctgagcacgcaagatgtgttcttaaacattgcc
ggagggatcagggttgaagacccggcgatcgatttggcggtgttaattgcgatcatttcc
tcacagcaggatattccgatttcgtctaaaaactgttttgctgccgaggtagggctgtcg
ggagagattagggccgtaaacagaattgagcaacgcatagcagaggccgataaactcggc
tttgaaaccatttatatttcgaaatacaatttaaaaggagtcgacagctccaaataccaa
ttggagattaaggccgttggtaaaattgaagaagtatttgaaatgatttttggctaa
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