Pedobacter endophyticus: IZT61_15970
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Entry
IZT61_15970 CDS
T07452
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pex03400
]
IZT61_15970
Enzymes [BR:
pex01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IZT61_15970
DNA repair and recombination proteins [BR:
pex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IZT61_15970
Prokaryotic type
IZT61_15970
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QPH38569
UniProt:
A0A7U3SQ47
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All DBs
Position
complement(3936714..3938012)
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AA seq
432 aa
AA seq
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MTPVSIFWFRRDLRLQDNAALYHALKGKNPVLPLFIFDKNILDKLAHNDARVTFIYQTIE
SLKKELRNLGSDLLVKYGNPEEVWPKILQDYPVKEVYTNRDYEPYARERDDNMFEFLRSE
KITFKTFKDQVIFEKDEILKADKTPYTVFTPYYKQWQAKLNDFYVKAYPTKRYFKSFLTT
KQLPLPGLKDMGFEKSNLQFPKISYTDKLDEYAAQRDFPALNGTTHIGLHLRFGTISIRK
AVSDAIDAKSNVWLSELAWREFYMMILWHFPYAAFNSFKKQYDKIKWRNNENEFRAWCEG
NTGYPIVDAGMRQLNQTGWMHNRVRMVVASFLSKHLLIDWRWGEAYFAEKLLDYEMASNV
GGWQWAAGSGNDAAPYFRVFNPELQTKRFDPKFEYIKKWVPEFGTKKYAQPIVEHTFARE
RVLKVFKEALAT
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgtttcaatattttggtttcgcagagatttacgcttacaggataacgcagcg
ctctaccatgcgctaaaaggcaaaaaccctgtgcttccgctctttattttcgataaaaac
attttagataagcttgctcacaacgatgcccgggtgacttttatctatcaaacgattgaa
agtttgaaaaaagagcttcgaaatcttggatcagatttgttggtgaaatatggaaaccca
gaagaagtatggccgaagatattgcaagattaccctgttaaggaggtgtacaccaatcgc
gattacgagccttacgcccgggagcgtgacgacaacatgttcgaatttttaaggagtgaa
aaaatcacctttaaaacgtttaaagaccaggtaatttttgagaaagatgagatcttaaaa
gcggataaaacgccttacacagtttttacgccgtactataaacaatggcaagcgaaactg
aacgatttctatgtaaaagcttatccgacaaagcgatactttaaaagctttttaacaacg
aagcaactgccactgcctggcttaaaggatatgggttttgaaaaaagcaacttgcaattt
ccaaaaatcagctataccgataagctggatgaatatgctgctcaacgagattttccggct
ttaaacggcacaacacacatcggtttgcatctccgttttggaacgataagcatcaggaag
gccgtgagcgatgccattgatgcaaaatcaaatgtttggctgtctgaattggcctggcgt
gaattttatatgatgattctttggcattttccttatgcagcattcaattcgtttaaaaaa
cagtacgacaaaataaagtggcgtaacaacgaaaatgagttccgggcctggtgcgaagga
aatacaggctacccgattgttgatgccgggatgcgacagcttaaccaaacaggctggatg
cacaaccgggtgcgcatggttgtagccagttttttatcgaagcacctgcttattgattgg
cgctggggcgaagcttattttgccgaaaaactgctggattacgaaatggccagtaacgtt
ggcggctggcaatgggcagcgggatctggaaacgatgcggcaccttatttcagggttttt
aaccccgagctgcaaaccaaaaggttcgaccccaaatttgaatacatcaaaaaatgggtg
ccagaatttggtacaaaaaaatatgcccaaccaatagttgagcatacgtttgcacgagaa
agggtgctaaaagtgtttaaagaagcgttggctacttag
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