Pedobacter endophyticus: IZT61_16235
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Entry
IZT61_16235 CDS
T07452
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pex01002
]
IZT61_16235
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pex01011
]
IZT61_16235
Peptidases and inhibitors [BR:
pex01002
]
Cysteine peptidases
Family C82
IZT61_16235
Peptidoglycan biosynthesis and degradation proteins [BR:
pex01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
IZT61_16235
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QPH38614
UniProt:
A0A7U3SQ64
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Position
3998985..4000577
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AA seq
530 aa
AA seq
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MKKVLLFIFPLLVFCSLFKTAEADSINKKAHHLKDSILVTAFHTDSVHVEEFIKKNPFGP
VVADQIRQFYKTRDYQNAWITEDGLSEHAQIFLNLYDQYRLYSADSSFKNVHLASQLELL
QSEGMSIDSLKTYEQLELKLTVFFIHFIKRAYAGKVDPEKFQWHIPRKKIEVARLLNELV
LSKDLILDSWLPISEEYKAMRDHVLRLKCIPQEKWTNISLLEGKNIKQGDTSKSVKAIKN
RLLLLGDLTIGDTTEIYTNQLLNAVKGFQVRHGLTMDGIIGPNFLEALNMPIQKKIEQML
INMERMRWMPKYEARKRVVVNIPEFRLHVYEGNKDILSMDVVVGKAATRTVIFSDQIKHV
VFSPYWNLPQSIVKNEVLPGLESNPNYLIDHNMELRGQRNGLPIIRQKPGPSNALGRVKF
IFPNKYSIYLHDTPSKQLFQRTTRAFSHGCIRVEDPSAFAANLLFQKKEWTSKKIKDAMS
SNLELWVNLDSPVPVYITYFTSWIDSSGKLNFRKDIYGHDKRLASHLFEH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtacttctttttatttttcctcttctggttttctgctctttatttaaaact
gcagaagcagattccataaacaaaaaagcgcatcatttgaaagattcaattttggttacc
gcttttcacactgacagtgttcatgtagaggagtttatcaaaaaaaatccgtttggacct
gtcgttgcggatcagatcaggcagttttacaaaacacgcgactaccagaacgcatggata
accgaagatggtctttcagaacatgcgcagatctttttgaatttgtacgatcaataccgg
ttatactcggcagattcctccttcaaaaatgtacacctcgcttctcaacttgagctacta
caaagtgagggaatgagcatcgattccctcaaaacttatgaacaacttgaactaaaactc
actgttttttttatacattttataaagcgagcctatgcaggtaaagttgatcctgaaaaa
tttcaatggcatatccctagaaaaaaaattgaagtagctagacttttgaatgaacttgtt
ttatccaaagacttaatcctcgattcctggttacctattagtgaagaatacaaagccatg
agggatcatgtactgcggttaaaatgcattccacaagaaaaatggacaaatatttcgctg
ttggaagggaaaaatataaaacaaggggatacttccaaaagtgttaaggctataaaaaac
agattgttactacttggcgatctgacaataggggatacgacagagatctatacaaatcaa
ttgttaaatgctgtaaaaggctttcaagtccggcatggattgaccatggatgggatcata
ggacctaattttctggaagcgctaaatatgcctattcaaaaaaaaatagaacaaatgctg
attaacatggaaaggatgcgttggatgcctaaatatgaagcacgcaaaagagttgtcgta
aatataccagagtttaggttacacgtgtatgaagggaataaggatatactaagcatggat
gtggtagtaggcaaagcagcaaccagaacagtaatcttttcagatcagatcaagcatgtt
gtgtttagtccttactggaacctaccacaaagcattgttaagaatgaagtgcttcccgga
ttagaaagcaatccaaactatttgatcgaccacaacatggagcttcgtggccagcgaaat
ggattaccaattattcgacaaaaacctggacccagcaatgcgcttggaagagttaaattt
attttccccaacaaatacagtatctatttacatgacaccccatccaaacaattattccag
cgaacaaccagagcgtttagccatggctgcatccgagtagaagatccctctgcattcgct
gcaaatcttctcttccaaaagaaagaatggacttcaaaaaaaataaaagacgcaatgtct
tcgaatttagaactatgggtcaatttggatagtcctgtgccagtatatataacgtatttt
acttcctggatagattcatcaggtaaactgaattttagaaaggacatttatggacacgat
aaaagacttgcgtcccatttgtttgagcactga
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