Pedobacter endophyticus: IZT61_16510
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Entry
IZT61_16510 CDS
T07452
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
IZT61_16510 (ltrA)
Enzymes [BR:
pex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
IZT61_16510 (ltrA)
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GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
Motif
Other DBs
NCBI-ProteinID:
QPH38666
UniProt:
A0A7U3Q6I3
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All DBs
Position
4057573..4059237
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AA seq
554 aa
AA seq
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MNVIEKSCAPSDQVFHWNSIDWDRCESEVRKLQVRLVKAQKESRHNKVKALQWLLTHSFY
AKALAVKRVTSNKGRNTAGVDNKLWSTPIAKSRAINDLKRRGYQPQPLKRVNIKKSNGKE
RPLGIPTMKDRAMQALYLLALAPVAETTADGPSYGFRKERCAQDALQFAHSLLSKSYSPE
WVLEADIKGCFDHISHEWLLANVPMDKSILQKWLKCGFIFKNERFSTDEGTPQGGIISPT
LANIALDGLQSLIASKFKIRKVNKVAIVPKVKLIRYADDFIITGKTKEQLETEVLPLIKE
FLAERGLSLSHEKTKITHITDGFDFLGFNIREYDNGSVMTIPSKAGLLKLSEKIGGIIRA
NKTSRQDVLIRQLNPVITGWANYFKTSSASDTFRKVDFLMFHKLWSWALRRHPKKGRYWI
SERYFRRIKNRNWCFATDTPGHEGTSEVFSLKRAYDFKILRHIQIKQDANPFDQEWEPYF
QKRKVFRMLETLDGKKTLLALWLKQNRKCDLCGRDINADDEWAINKRRFGEDIRITLVHK
PCRRSHDQLKLRLT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattgaaaaatcgtgtgcgccttctgaccaagttttccactggaacagtatt
gactgggacaggtgtgaatcagaggttagaaagctacaagttagacttgtaaaggctcag
aaagagtccaggcataacaaagtgaaagctttgcaatggctgctgactcattcgttttat
gccaaagctttggcagtaaagcgggtaacctctaacaaaggtaggaatacggcgggagtg
gacaacaaattgtggtctaccccaattgctaaatctcgggcgatcaacgacctgaaaagg
agaggttatcaacctcaaccgttaaaacgggttaatattaaaaagagtaatggtaaagaa
cgtcctctgggaattccgactatgaaagacagggcaatgcaggcgttgtatctattggcc
ttagcgccagtcgctgaaacaacagcggacggaccatcatatggtttccgtaaggaacgt
tgcgctcaggatgcattgcagtttgcacatagcctgctatcaaagagttattctccagag
tgggtacttgaagccgatatcaaaggatgctttgatcacatcagccatgagtggttactt
gctaatgttccaatggacaaaagcattctccaaaagtggctgaaatgtggtttcatcttt
aagaatgagcgcttttccactgacgagggtactccgcaagggggtatcatctcaccaact
ctggccaatattgcactggatggattgcagtcattgattgcaagtaagtttaaaatcaga
aaagtcaacaaggtggcaattgtacctaaggtaaaattgatccgctatgctgatgatttc
attatcacgggtaaaaccaaagaacaattggaaacagaagtgttgccgttaattaaggaa
tttcttgcagaaagaggtttatcactttcgcacgagaaaaccaagataacgcatattact
gacggattcgactttttaggcttcaatattcgtgagtatgataatggttctgttatgact
ataccatcaaaggcaggtcttttgaaactatccgaaaagattggaggcatcattcgtgcc
aataaaaccagtcgccaggatgttctcatcagacaattaaaccctgtaataactggttgg
gcgaactactttaaaactagttcagcctcagatacctttagaaaagttgatttcctgatg
tttcacaagctatggtcttgggcattaaggagacatcctaaaaagggaagatactggatt
tcagaaaggtatttccgcaggatcaagaatagaaattggtgttttgcgaccgatacgcct
ggacacgaaggaacaagcgaagtcttttcccttaaacgagcgtacgactttaaaatactt
aggcatattcagatcaaacaggatgcaaacccttttgaccaggaatgggaaccttacttt
caaaagcgcaaagtatttagaatgcttgaaactttggatggtaaaaagaccctgttagca
ttgtggttgaagcaaaaccgtaaatgtgatttatgtggtagggatataaatgcggatgat
gaatgggctattaacaaacgcaggtttggtgaagacattcgcatcacattggtacataaa
ccctgccgcagaagccacgaccaactaaagttgaggttaacatga
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