Pedobacter endophyticus: IZT61_16775
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Entry
IZT61_16775 CDS
T07452
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pex02000
]
IZT61_16775
Transporters [BR:
pex02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IZT61_16775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_19
TPR_1
TPR_2
ANAPC3
Motif
Other DBs
NCBI-ProteinID:
QPH38709
UniProt:
A0A7U3Q521
LinkDB
All DBs
Position
4104726..4106198
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AA seq
490 aa
AA seq
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MLKSLKKIALLGLFLSGLTGCQKDYLDASPEHLQNAGNFFQSKNDFIQAVNGAYAPLRPL
FTDSFWQLGEMRSDNTSFQYNTGDRSAIGREQNDQFLELDDNPFVYSFFANSFTGIGRCN
VILNRYDEAKIGDANAARQILGQASFLRAYYYLNLVQLFGEVPLVLTEVTSTNDAFDKAK
RKPVAEIYQSIIKDAGVAVNNLPAAYPAPTDLGRVTSTAAHMLLAKVYMVQKQYSQAMEH
LNIILQSQKALNPDYSSNFNPLAKNSVESVFEVQFLEGPFGMASNFMYTFAPYNAGTSIT
GFGLYTGADSGWNIPTADLLAAYEPGDLRLAKSINRTFVDPNTNQVVPYTIKFRSAHSIR
YQTNDNFPVYRFSDALLMAAEALNEIGYTSSGQAFTHINRVRARAGLAGLSPQQVSTQEL
FREAVWKERQVELAFENHRWFDLLRTGRAAAVMQSHAAREKALKSHVPAAAYNNIRLLFQ
YPRREVLLEQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaatcattaaaaaaaatagcgctattgggcctgtttctatccggattgaccggt
tgtcagaaggattatctggatgcgagcccggagcacctgcagaatgcgggaaactttttc
cagtcaaagaatgactttattcaagctgtaaatggtgcttacgcgccactgagaccgctt
tttaccgattcattctggcagcttggggagatgaggtcggataatacttctttccagtat
aataccggcgaccgctcagcgattggccgggaacagaatgatcagttcctggaacttgat
gacaatccctttgtttattctttctttgccaactcatttaccggaataggcaggtgcaat
gtaattctcaaccgttatgatgaggcaaaaatcggcgatgcgaatgctgccaggcaaatc
ctgggccaggcgagctttctaagggcatattattatcttaacctggttcagcttttcggg
gaagttccgcttgtgctcaccgaggtgacctcgacgaatgacgctttcgataaagcaaag
agaaagcctgtcgcggagatatatcaatccataattaaagatgcaggtgttgcggtaaat
aatcttccggccgcataccctgcccctacagacttgggcagggtgaccagcactgctgca
catatgctgctggcaaaggtgtatatggtccaaaaacaatattcacaggccatggaacac
ctgaatattatcttacagtcgcaaaaggcactaaacccggattattccagcaatttcaat
ccattggcgaaaaattccgttgagtcggtttttgaggtccaattccttgaaggtcctttt
ggaatggccagcaattttatgtataccttcgccccctacaacgccggcacgagcatcacc
ggtttcgggctttacacaggtgcagattcgggctggaatatcccgactgcagaccttctg
gcagcttatgaaccaggggatctcaggctggccaaatcgataaacaggacttttgttgac
cccaataccaatcaggttgttccctataccattaagttccgaagcgcacacagcatccgc
tatcagaccaatgataattttccggtgtaccgcttttctgatgcacttctgatggctgct
gaagctttgaatgaaattggatatacttcttccggacaggcatttacccacatcaatagg
gtgcgcgcccgtgcagggcttgctgggctaagcccgcagcaggtatccacccaggaactt
ttccgtgaagcagtgtggaaggagcgacaggtcgaactggcgtttgaaaaccaccgctgg
tttgatctgctcaggacaggcagggctgccgctgtaatgcaatcccacgcggcaagggag
aaggccctgaaaagccatgttcctgcggctgcatacaataacatccgtttattatttcaa
tatccacgcagggaagttcttttagaacaataa
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