Pedobacter endophyticus: IZT61_17105
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Entry
IZT61_17105 CDS
T07452
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pex
Pedobacter endophyticus
Pathway
pex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IZT61_17105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pex03400
]
IZT61_17105
DNA repair and recombination proteins [BR:
pex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IZT61_17105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
ATPase_2
SbcC_Walker_B
AAA_27
DUF6884
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QPH38771
UniProt:
A0A7U3SQV7
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All DBs
Position
4182205..4183308
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AA seq
367 aa
AA seq
DB search
MWLKNVTLLNFKNYSDADVHFSETVNVFTGNNGSGKTNMLDAIHYLCLCKSYFNPIDGQQ
IKSGEDVFMIQGDFDRSKKNEKVSCGVKRNQKKQFKRNKKEYEKLADHIGLFPVVMVSPY
DVNLIMEGSEERRKFIDNVISQTDSHYLDQLITYNRVLANRNALLKQIAITKRYDPTLLE
ILDEQLVTAGNKIFATRKAFMDEFILLFNQYYIYLTDNNERVELNYQSQLNENSFEDLLK
KSVEKDRVLERTTTGIHKDELVFSIAEMPLKKFGSQGQQKSFLIALKLAQYAYLAKNKGF
KPLLLLDDIFDKLDDNRVQKLMQMVSHHDFGQIFITDTGIERVKSIFNRIDVDATFFEVT
EGQIKNA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtggttaaaaaacgtcacccttttaaatttcaaaaattatagcgatgctgatgttcac
ttctctgaaaccgtgaatgtttttacaggtaataacggatcgggcaaaaccaacatgctc
gatgccattcactacctgtgtttatgcaaaagttattttaacccgattgacgggcagcag
ataaaaagcggtgaggacgtgttcatgattcagggcgatttcgaccggagtaaaaagaac
gaaaaggttagctgcggcgtaaaacgcaaccagaaaaaacaatttaagcgcaataaaaaa
gaatacgaaaaactcgctgatcatatcggtttgtttcctgtggtcatggtttctccatac
gatgtcaacctgattatggaaggcagcgaagagcgcagaaagtttatagataacgtaatt
tcgcaaaccgattcgcattatctcgatcagctgattacctacaaccgcgtgcttgcaaac
agaaatgcacttttaaagcaaattgcaattacgaaaagatacgaccctactttgctcgag
attttggatgagcagttggtaacggccggcaataagatctttgccacacgcaaggccttt
atggatgagtttattttgctgtttaaccaatattatatctaccttacggataacaatgaa
agggtagaactcaactatcaatcgcaattaaacgagaacagcttcgaggatttgctaaag
aaatctgtagaaaaagaccgggttttagaacgtacaacaaccgggatacataaagatgag
ctggtattttcgatcgctgaaatgccacttaaaaaatttgggtctcaaggacaacaaaaa
tcgtttttgatagcactcaaactggcacaatatgcctatttggcaaaaaataaaggcttt
aaaccgcttcttttgttagatgatatttttgataaattagacgacaaccgcgttcaaaag
ctaatgcaaatggtgtcgcaccacgatttcggtcaaatatttattaccgatacgggcatt
gaaagagtaaaatcaatttttaatagaatagacgttgatgcaacgttttttgaagtaacg
gaaggacaaataaaaaatgcgtaa
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