Pedobacter endophyticus: IZT61_17710
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Entry
IZT61_17710 CDS
T07452
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pex02000
]
IZT61_17710
Transporters [BR:
pex02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IZT61_17710
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
QPH38881
UniProt:
A0A7U3Q5B0
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All DBs
Position
complement(4330779..4332344)
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AA seq
521 aa
AA seq
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MRSSKYTGVKLTKFLIALLLLSLSSLNFSCKKVLDEKSTRLVAEENQWKNQEDAKAALIG
MYALMRTALVADNTHWLMGDLRQGDFVATNRSDLKAIIDGKLNASFPTLNRITNWRRFYS
VINAASVLIERSHEIVDNDPRYTAINNRADVAQARAVRAFAYFYMVRIWGDVPLLTSSHD
GQFSTKPRTSQDRVLGFATSELLAAAKILPFRYGSNDPLLPGLYYGGSWASWCGTVFTKM
SAYAVLAHIAAWQGKYLDCDVYTKFFVDNVTQLNGDGVNVKYVTTNELTENDGSYSPFVY
KRVQQIIGYAFEYGLGEATANGHIEQLTLAKPLILKEYPEIFVPKDTIRKAFTDPKDERF
SIDPLTKLYRTNYFTNYISERPIFSKIKVIGDGQTSGNLAFFTSAVVFTRLEEVLLLRAE
ALAVLGSRNEAISTLNKAADLRGTSPYTSATPIDLIDAIFAERRRELMGEGWRWYDLVRY
NKIKRNNPAFNTLISSGGIYWPVSSDILNANNQIKQNPYWN
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagatcatcaaaatataccggcgttaaattaactaagtttttaattgcgctattacta
ctctcgctaagcagccttaatttttcctgtaaaaaagttttggatgaaaaatcaaccagg
ctggttgctgaagagaaccaatggaaaaatcaagaggatgccaaagcggcattaattggg
atgtatgccttaatgcgaacggcattggtagctgataatacccactggttaatgggcgat
ttacggcagggcgattttgttgctacaaaccgaagcgatttaaaggccattattgatggt
aaactaaatgcttctttcccgacattaaacagaattacgaactggaggcggttttattcg
gttattaatgcggccagtgtgttaatcgagcgttcgcatgaaattgttgacaacgatccg
cgttatacagccattaacaaccgggccgatgtggcacaggccagagccgttcgtgctttt
gcttatttttacatggttcggatttggggagatgtacccttattaacaagttcgcacgac
gggcaattttctacaaagccgcgtacatcgcaagatcgggtgttgggttttgccacctcg
gaactcctggcagcggccaaaatactgcctttcagatacggaagtaacgatccgctttta
ccaggcttatactatggagggagctgggctagctggtgcggcacggtgtttaccaagatg
tcggcttacgctgttcttgcacatatcgctgcatggcaaggcaaatatctggattgcgat
gtttataccaaattttttgttgacaatgttacgcagctcaacggcgatggtgtgaacgtc
aaatacgttaccacaaatgaacttactgaaaatgatggcagttacagcccttttgtatat
aagcgtgtacagcaaattattggttatgcctttgaatatggcttgggcgaggcaacggcc
aatgggcatatagagcagcttacactggccaaacctttgatattaaaagagtatcccgaa
atttttgtaccaaaagataccattcggaaagcctttactgatccgaaagatgaacgtttc
agtatcgatcctttaaccaagttgtaccgtacaaattacttcactaactacatcagcgaa
cgcccaatatttagcaaaattaaggtgattggagatggacaaaccagtggaaacctggct
ttctttacttctgcagtggtatttacccgtttagaagaagtactgctgttaagggccgaa
gcattagctgttttaggctcccggaacgaggcaataagtacactaaacaaggccgctgat
ttgaggggaacctcgccttatacatcggctacaccgatcgatttaattgatgcaattttt
gctgaacgcagaagggagctcatgggagaagggtggcgttggtatgatttggtgagatac
aacaagattaaacgcaacaaccccgcatttaacaccttaattagcagtgggggcatttat
tggccggtatcaagcgatatcctgaacgctaacaatcaaattaaacaaaatccatattgg
aattaa
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