Pedobacter endophyticus: IZT61_19140
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Entry
IZT61_19140 CDS
T07452
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00550
Peptidoglycan biosynthesis
pex01100
Metabolic pathways
pex01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IZT61_19140 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IZT61_19140 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pex01011
]
IZT61_19140 (mrdA)
Enzymes [BR:
pex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IZT61_19140 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pex01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IZT61_19140 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
UPA
Motif
Other DBs
NCBI-ProteinID:
QPH39147
UniProt:
A0A7S9KYF3
LinkDB
All DBs
Position
complement(4689677..4691686)
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AA seq
669 aa
AA seq
DB search
MDQLFNRKYVVQGLFIVIALILLGKLFYIQIISDKAFLSAESNVLKKKYKYPARGAILDR
NGKVIVQNVPVYDLMVIPNEVKDFDTVALANALEISIADVRKFMRKAKAKSNYQATPFVK
QISVQSYARLQEIMYRFPGFATQDRTIRYYPDSVGGQLFGYVKEVDSADIANSNGYYKPG
DYKGKSGLEKSYEEVLRGEKGVVNTIYDVHNTPQGSYANGKYDVNAVSGERLLSSIDMRI
QKLGEELMKNKVGAIVAIEPSSGEILSLISSPGYDPNLLVGRNQGNNYMEFIVGNPYRPS
LVRPIMGYYPPGSSFKPVDALIGLQEGVIDPNTTFFCPHYYQAGNRRIKCEHFDGSIALR
RGIARSCNTYFCYVFQKLITKNGMKNQRKTYQEWRDKVAKFGFGDTLGIDMPYERKGYFY
TAEHYDKIYGKRWGYTNVISQAIGQGEITATPLQIANAMAVIANRGYYIKPHLIKGVGDK
NQVSEQYVKKHYVGVDAKHFGPVIDGMQDAVNESWGTATLSRIPDILLCGKTGTVQNPHG
KNHSVFIGFAPRDNPKIAIAVIVENAGFGSTYAAPIASYMIEKYLKGAIAGPREAQVEWM
KNQNLLPVLKDKTKAPKLTKADSLSIKKADSTKKVKDSLRIKAATDRQSVATKPKNPQLL
VAKKPLTTN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattatttaatcggaaatatgttgttcagggattattcatcgtaatagcttta
attctattaggtaagcttttttatattcaaattattagcgataaagcatttttatcggct
gagagtaacgtacttaaaaaaaaatacaagtaccccgcccgcggagccatattggatagg
aacggaaaggttattgtacagaatgttcccgtttacgacttaatggtaatcccgaacgaa
gtaaaagattttgataccgttgctttagcaaatgccctcgaaatttcaattgccgatgtg
cgcaaatttatgcgtaaggccaaagccaaatccaactatcaggccacgcccttcgtaaag
caaatttcggttcagagctatgcccgcctgcaagaaattatgtaccgttttcctggcttc
gccacacaagatcgtaccattcgctattatcctgatagtgttggcggccaattgtttggt
tacgtaaaagaagttgatagtgccgacattgcaaactcaaacgggtattacaaaccgggg
gattataagggtaaaagcggactcgaaaaatcgtacgaagaagttttaaggggagaaaaa
ggcgtggtaaacaccatttacgatgtacataacaccccgcaaggaagctacgccaacggc
aaatacgatgtaaacgcggtttcgggggagcgcttgctctcgagtatcgacatgaggatt
caaaagctcggcgaagaactgatgaagaacaaagttggagccattgtagccattgagcca
tccagcggcgaaatcttatcgctaatcagtagtcccggttacgatcccaatttgttggtc
ggacgaaatcagggcaacaattacatggagtttattgtcggtaatccctatcggccatcg
ctggttcgcccaattatgggttattatcctcccggctcttcgtttaaacctgttgatgca
cttattggccttcaagaaggtgtaattgatccgaatactacctttttctgtccgcattat
tatcaggccggaaaccgacgtataaaatgcgaacactttgatggttctatcgctttaagg
cgaggcatcgcccgctcgtgcaacacctatttttgctacgtttttcaaaagctgattacg
aaaaacggcatgaaaaaccaacgaaaaacttatcaagaatggagggataaagtggccaag
tttggttttggcgatacgctgggcatcgacatgccttacgaaagaaagggctacttttac
accgccgaacattacgataagatttatgggaaacgatggggctataccaacgtaatttct
caagccattgggcagggtgaaattaccgccacgcctttgcaaattgctaacgccatggcc
gttattgccaatcgcggttattacattaagccacacttaattaaaggcgttggcgataaa
aatcaggtaagcgaacaatacgttaaaaaacactatgttggtgtagatgcaaagcatttc
ggcccggtgatagatggcatgcaggatgcggtaaatgaaagttggggaacggcaacatta
tcaaggattccggatatattgctctgcggtaaaaccggaacggtacaaaatccacacggt
aaaaaccactctgtatttatcggctttgccccccgcgataatccgaaaattgcaatagcg
gttattgtagaaaacgcaggcttcggaagcacctatgccgcaccgattgccagttacatg
atcgaaaaataccttaaaggcgctatagccggccctcgggaggcacaagtagaatggatg
aaaaaccaaaatctgctacctgttttaaaagataaaaccaaagcgcctaaattgacgaaa
gcagacagcttatcgattaaaaaagcagattcgactaaaaaggttaaggatagtttaagg
attaaagcggcaacagacagacaaagcgttgccacaaaaccaaaaaacccgcaattgtta
gtcgcaaaaaaaccattaacaactaattaa
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